BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036503
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    92   7e-17
ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript...    84   2e-14
gb|ABK28243.1| unknown [Arabidopsis thaliana]                          84   2e-14
gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thali...    84   2e-14
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    83   4e-14

>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 72/229 (31%), Positives = 97/229 (42%), Gaps = 12/229 (5%)
 Frame = -2

Query: 652 SLWYDPWP--GRSLFDIFGNNIISIMESTNEAKVYSFQSGNSWAQLPSNHYLAIELRQLL 479
           S WYD W   GR L D  G+     +     A V          +  +N    +E R +L
Sbjct: 204 SFWYDDWSDLGR-LIDSAGDRGAIDLGINKHATVVEAWGNRRRRRHRTNFLNRVEERLIL 262

Query: 478 TSIPIYQS-DSISWNGSRK-----INISTIWNSIRTNXXXXXXXXXXXXXWMISKCSFFM 317
           +     Q+ D   W G         +    WN IRT                I K +F M
Sbjct: 263 SWNSRNQAEDRALWKGKENRFRSIFSTKDTWNHIRTVSNKVAWYKGVWFAQAIPKHAFCM 322

Query: 316 WLALWNRLLTKDRMAHFGMTVDQSCILCNAGMESAAHLFVDCSFAAEIMQD--SPVPLTC 143
           WLA+ NRL T DRM  + M VD +CILCN  +ES  HLF  C FA EI +     +  TC
Sbjct: 323 WLAVHNRLSTGDRMTLWNMGVDATCILCNKALESRDHLFFSCPFATEIWEPLAKTIYNTC 382

Query: 142 NWNEY--LQGNFVRCAKSNAHKNLAYLFLGVVVHEIWKERNKRIHAQMP 2
            + ++  +  N  R         LA   L V ++ +W+ERN+R H   P
Sbjct: 383 FYTDWQTIINNVSRNWPDRIAGFLARCILQVTIYTLWRERNERKHGASP 431


>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
           to a family of Arabidopsis thaliana predicted proteins,
           which have similarity to reverse transcriptases; see
           T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
           gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
           thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 332

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 15/227 (6%)
 Frame = -2

Query: 646 WYDPWPGRS-LFDIFGNNIISIMESTNEAKVYSFQSGNSW--AQLPSNHYLAIELRQLLT 476
           W+D W G   L ++ G      +    +A V     G SW  A   S + + ++L+ LL 
Sbjct: 25  WHDNWIGLGPLIEVIGPLGPRTVGLPIDAVVRDALRGTSWWIASSRSRNPIIVQLKNLLP 84

Query: 475 S----IPIYQSDSISWNG-----SRKINISTIWNSIRTNXXXXXXXXXXXXXWMISKCSF 323
                +     DS  W       S + +    W+++                  + K +F
Sbjct: 85  EAQGLLDCQHDDSFLWKTDLHAPSNRFSAPRTWSALHPQSHTVPWHKAVWFKNHVPKHAF 144

Query: 322 FMWLALWNRLLTKDRMAHFGMTVDQSCILCNAGMESAAHLFVDCSFAAEIMQDSPVPLTC 143
             W+  WNRL T+DR+ ++G+++   C+LCNA  +S AHLF +C F+  + +        
Sbjct: 145 ICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFSGVVWRFFTASTNL 204

Query: 142 NWNEYLQGNFVRCAKSNAHKNLAY---LFLGVVVHEIWKERNKRIHA 11
           N    L          +  KN+     L     V+ IW+ERN+R+H+
Sbjct: 205 NPPAQLMDCLNWLLSPSREKNICLIIRLAFHSCVYAIWRERNQRLHS 251


>gb|ABK28243.1| unknown [Arabidopsis thaliana]
          Length = 297

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 15/227 (6%)
 Frame = -2

Query: 646 WYDPWPGRS-LFDIFGNNIISIMESTNEAKVYSFQSGNSW--AQLPSNHYLAIELRQLLT 476
           W+D W G   L ++ G      +    +A V     G SW  A   S + + ++L+ LL 
Sbjct: 25  WHDNWIGLGPLIEVIGPLGPRTVGLPIDAVVRDALRGTSWWIASSRSRNPIIVQLKNLLP 84

Query: 475 S----IPIYQSDSISWNG-----SRKINISTIWNSIRTNXXXXXXXXXXXXXWMISKCSF 323
                +     DS  W       S + +    W+++                  + K +F
Sbjct: 85  EAQGLLDCQHDDSFLWKTDLHAPSNRFSAPRTWSALHPQSHTVPWHKAVWFKNHVPKHAF 144

Query: 322 FMWLALWNRLLTKDRMAHFGMTVDQSCILCNAGMESAAHLFVDCSFAAEIMQDSPVPLTC 143
             W+  WNRL T+DR+ ++G+++   C+LCNA  +S AHLF +C F+  + +        
Sbjct: 145 ICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFSGVVWRFFTASTNL 204

Query: 142 NWNEYLQGNFVRCAKSNAHKNLAY---LFLGVVVHEIWKERNKRIHA 11
           N    L          +  KN+     L     V+ IW+ERN+R+H+
Sbjct: 205 NPPAQLMDCLNWLLSPSREKNICLIIRLAFHSCVYAIWRERNQRLHS 251


>gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thaliana]
          Length = 296

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 15/227 (6%)
 Frame = -2

Query: 646 WYDPWPGRS-LFDIFGNNIISIMESTNEAKVYSFQSGNSW--AQLPSNHYLAIELRQLLT 476
           W+D W G   L ++ G      +    +A V     G SW  A   S + + ++L+ LL 
Sbjct: 25  WHDNWIGLGPLIEVIGPLGPRTVGLPIDAVVRDALRGTSWWIASSRSRNPIIVQLKNLLP 84

Query: 475 S----IPIYQSDSISWNG-----SRKINISTIWNSIRTNXXXXXXXXXXXXXWMISKCSF 323
                +     DS  W       S + +    W+++                  + K +F
Sbjct: 85  EAQGLLDCQHDDSFLWKTDLHAPSNRFSAPRTWSALHPQSHTVPWHKAVWFKNHVPKHAF 144

Query: 322 FMWLALWNRLLTKDRMAHFGMTVDQSCILCNAGMESAAHLFVDCSFAAEIMQDSPVPLTC 143
             W+  WNRL T+DR+ ++G+++   C+LCNA  +S AHLF +C F+  + +        
Sbjct: 145 ICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFSGVVWRFFTASTNL 204

Query: 142 NWNEYLQGNFVRCAKSNAHKNLAY---LFLGVVVHEIWKERNKRIHA 11
           N    L          +  KN+     L     V+ IW+ERN+R+H+
Sbjct: 205 NPPAQLMDCLNWLLSPSREKNICLIIRLAFHSCVYAIWRERNQRLHS 251


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 60/230 (26%), Positives = 97/230 (42%), Gaps = 14/230 (6%)
 Frame = -2

Query: 652 SLWYDPW-PGRSLFDIFGNNIISIMESTNEAKVYSFQSGNSWAQLPSNHYLAIELRQLLT 476
           SLW+D W P   L D +G   I        AKV      + W + P+    AI    ++ 
Sbjct: 242 SLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEW-KTPTTQ--AIGWHPIIE 298

Query: 475 SIP------IYQSDSISWNGS--RKINISTIWNSIRTNXXXXXXXXXXXXXWMISKCSFF 320
           +IP      + Q D + W  S   + ++   W  +R +               + + SF 
Sbjct: 299 AIPSNSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFL 358

Query: 319 MWLALWNRLLTKDRMAHFGMTVDQSCILCNAGMESAAHLFVDCSFAAEIMQD----SPVP 152
           +W+A+  +L T+D++  FG+     C LC    E   HLF +CS+   I  D      +P
Sbjct: 359 LWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIP 418

Query: 151 -LTCNWNEYLQGNFVRCAKSNAHKNLAYLFLGVVVHEIWKERNKRIHAQM 5
            +T  W+E+++   V     +       L     V+ +W+ERN RI A M
Sbjct: 419 RMTKGWDEWIRWATVSWHGKSFVNFSCKLSFAATVYHVWQERNARIFAGM 468