BLASTX nr result

ID: Bupleurum21_contig00036495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036495
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr...    74   2e-11
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    64   2e-08
ref|XP_002331231.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-07
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   3e-07
ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06

>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
 Frame = +3

Query: 417 PFFLNLMLVDLCAYNVRGLNN--KQPYIKDFLCSNKVSLIALVKTRVHNNKADSISRRVA 590
           P + ++ LV    +NVRG N   KQ  IK+FL  NK  +  LV+TR+  +K + IS  + 
Sbjct: 513 PLWFDMKLV---CWNVRGCNKPFKQKEIKNFLLKNKFDMCILVETRIKADKFNKISSMIF 569

Query: 591 PGFQWIFNYESHYNGRLWVGWNPSIWSISVISKSAQAI 704
             +  + NY+S  NGR+WV WNP++  +  I+ SAQAI
Sbjct: 570 KRWPVLNNYDSAANGRIWVSWNPTVLDVKPIASSAQAI 607


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
 Frame = +3

Query: 447 LCAYNVRGLNN--KQPYIKDFLCSNKVSLIALVKTRVHNNKADSISRRVAPGFQWIFNYE 620
           +  +NVRGLN+  K   +K FL S K+SL +L +TRV    +  I ++    + WI NY 
Sbjct: 3   ITTWNVRGLNDPIKVKEVKHFLHSQKISLCSLFETRVRQQNSGKIQKKFGNRWSWINNYA 62

Query: 621 SHYNGRLWVGWNPSIWSISVISKSAQAI 704
               GR+WVGW  +  +I+V+S + Q I
Sbjct: 63  CSPRGRIWVGWLNNDVNINVLSVTEQVI 90


>ref|XP_002331231.1| predicted protein [Populus trichocarpa] gi|222873417|gb|EEF10548.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
 Frame = +3

Query: 456 YNVRGLNN--KQPYIKDFLCSNKVSLIALVKTRVHNNKADSISRRVAPGFQWIFNYESHY 629
           +NVRGLN+  K   ++  +   +++L ALV+TRV +   D++S+ +   + +++NY+   
Sbjct: 6   WNVRGLNDPIKHSALRRLIHQERITLFALVETRVRHKNKDNVSQLLLRNWSFLYNYDFSC 65

Query: 630 NGRLWVGWNPSIWSISVISKSAQAI 704
            GR+WV WN     + V+  S QAI
Sbjct: 66  RGRIWVCWNADTVKVDVLGMSDQAI 90


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
 Frame = +3

Query: 447 LC-AYNVRGLNN--KQPYIKDFLCSNKVSLIALVKTRVHNNKADSISRRVAPGFQWIFNY 617
           LC ++NVRG+N+  K   IK+FL S+K+ + AL++TRV    A  +  ++   ++W+ NY
Sbjct: 2   LCVSWNVRGMNDPFKIKEIKNFLYSHKIVVCALLETRVREQNASKVQGKLGKDWKWLNNY 61

Query: 618 ESHYNGRLWVGWNPSIWSISVISKSAQ 698
                 R+W+GW P+  ++++     Q
Sbjct: 62  SHSARERIWIGWRPAWVNVTLTHTQEQ 88


>ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
 Frame = +3

Query: 456 YNVRGLNN--KQPYIKDFLCSNKVSLIALVKTRVHNNKADSISRRVAPGFQWIFNYESHY 629
           +N+RGLN+  K   ++  +   +++L  LV+TRV +   D++S+ +   + +++NY+   
Sbjct: 6   WNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSC 65

Query: 630 NGRLWVGWNPSIWSISVISKSAQAI 704
            GR+WV WN     + V   S QAI
Sbjct: 66  RGRIWVCWNADTVKVDVFGMSDQAI 90


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