BLASTX nr result

ID: Bupleurum21_contig00036492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036492
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529123.1| DNA binding protein, putative [Ricinus commu...   103   4e-20
ref|XP_002314870.1| predicted protein [Populus trichocarpa] gi|2...    99   1e-18
emb|CAN78632.1| hypothetical protein VITISV_000033 [Vitis vinifera]    99   1e-18
emb|CBI27035.3| unnamed protein product [Vitis vinifera]               97   5e-18
ref|XP_002312391.1| predicted protein [Populus trichocarpa] gi|2...    89   1e-15

>ref|XP_002529123.1| DNA binding protein, putative [Ricinus communis]
            gi|223531402|gb|EEF33236.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 685

 Score =  103 bits (257), Expect = 4e-20
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 3/190 (1%)
 Frame = -1

Query: 645  HVYFPAEKRDTVICCKDLRPSEDWLGIGWKQIEERLDLVTLYFSSLDRKLDTIKSCEKGS 466
            HVYFP EK++ V  C DLR S++WLG  W  ++ R D++T   S LD+++  +KS E  S
Sbjct: 503  HVYFPGEKQELVFGCADLRHSQEWLGNRWMHLKCRPDILTSLSSFLDKQV--VKSNESKS 560

Query: 465  PPCQSSVCDDKVQVGYKEDKLCQEDILPDSCNIGD---KFTXXXXXXXXXXXXXXXXXXX 295
               ++ +CD +    +K    C +D+L DS + GD   K                     
Sbjct: 561  --IENGICDTRQSEKFKTG--CPDDLL-DSGSDGDGELKVVRDLLKDDRLAQLRWNSSKK 615

Query: 294  XXXXXXXSTQKLCQRVTNNKNRIRAFGTRTWEKFFVPSSVKVDNENCKYTRESAFGSSVA 115
                   STQ++  + +  K+      +R  E+F  P S+KVD+ENCK+ R+S F S+VA
Sbjct: 616  RRRSSGISTQRMHPKESGGKSSSEVISSRGCERFVFPMSIKVDHENCKFLRDSLFSSAVA 675

Query: 114  SPLSPLVMSR 85
             PL+ L+MSR
Sbjct: 676  QPLTNLIMSR 685


>ref|XP_002314870.1| predicted protein [Populus trichocarpa] gi|222863910|gb|EEF01041.1|
           predicted protein [Populus trichocarpa]
          Length = 598

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 2/193 (1%)
 Frame = -1

Query: 657 KDSIHVYFPAEKRDTVICCKDLRPSEDWLGIGWKQIEERLDLVTLYFSSLDRKLDTIKSC 478
           +D IHV+FP EK+++V CC DLR S++W+G  W  IE R D+++   S  +RK    +S 
Sbjct: 410 EDRIHVFFPGEKKESVFCCSDLRLSQEWVGNEWIHIEGRPDILSHLSSCWERKQLKFRSD 469

Query: 477 EKGSPPCQSSVCDDKVQVGYKEDKLCQEDILPDSCNIGDKFTXXXXXXXXXXXXXXXXXX 298
           E  S   Q+++ D + Q G K +  C +  L   C++G +                    
Sbjct: 470 E--SKLAQAAIPDSR-QSG-KANPGCIDYSLDSGCDMGKELKVVPDLSKDNLLAQLRWRS 525

Query: 297 XXXXXXXXSTQKLCQRVTNNKNR--IRAFGTRTWEKFFVPSSVKVDNENCKYTRESAFGS 124
                    +      + NN  R      G+ + E++ +P+++KVD+ENCKY  +S F S
Sbjct: 526 IKKRRRGSGSSGHKMHLYNNGGRRLSEVIGSNSGERYLIPTALKVDHENCKYMGDSLFTS 585

Query: 123 SVASPLSPLVMSR 85
           +V  PLS LVMSR
Sbjct: 586 AVVQPLSSLVMSR 598


>emb|CAN78632.1| hypothetical protein VITISV_000033 [Vitis vinifera]
          Length = 669

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 71/196 (36%), Positives = 95/196 (48%), Gaps = 5/196 (2%)
 Frame = -1

Query: 657  KDSIHVYFPAEKRDTVICCKDLRPSEDWLGIGWKQIEERLDLVTLYFSSLDRKLDTIKSC 478
            +D IHVYFP EK++ V    DLR SE+W    WK ++ER DLVT   S  + K    KS 
Sbjct: 481  EDRIHVYFPGEKQELVFGRSDLRHSEEWYENSWKHMKERPDLVTSILSGRESKHVVSKSS 540

Query: 477  EKGSPPCQSSVCDDKVQVGY--KEDKLCQEDILPDSCNI---GDKFTXXXXXXXXXXXXX 313
            +      Q+++CD    +G+  K++  C    L DS N    G  F              
Sbjct: 541  D--GKLAQTAICD----IGWSKKDEGGCVNSQL-DSGNDKLKGLGFVPDLLKDDTLSQLK 593

Query: 312  XXXXXXXXXXXXXSTQKLCQRVTNNKNRIRAFGTRTWEKFFVPSSVKVDNENCKYTRESA 133
                         S QKL   V  +K+     G+   ++FF+P S+KVD ENCKY  +S 
Sbjct: 594  WKTSRKRRRVSGGSVQKLHVNVNTSKSASEIMGSHACDRFFIPKSLKVDCENCKYVGDSL 653

Query: 132  FGSSVASPLSPLVMSR 85
            F SSV  PL+ LVMSR
Sbjct: 654  FSSSVVPPLTNLVMSR 669


>emb|CBI27035.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 2/193 (1%)
 Frame = -1

Query: 657 KDSIHVYFPAEKRDTVICCKDLRPSEDWLGIGWKQIEERLDLVTLYFSSLDRKLDTIKSC 478
           +D IHVYFP EK++ V    DLR SE+W    WK ++ER DLVT   S  + K    KS 
Sbjct: 178 EDRIHVYFPGEKQELVFGRSDLRHSEEWYENSWKHMKERPDLVTSILSGRESKHVVSKSS 237

Query: 477 EKGSPPCQSSVCDDKVQVGY--KEDKLCQEDILPDSCNIGDKFTXXXXXXXXXXXXXXXX 304
           +      Q+++CD    +G+  K++  C    L DS N  DK                  
Sbjct: 238 D--GKLAQTAICD----IGWSKKDEGGCVNSQL-DSGN--DKLKGLGFVPDLLKDDTL-- 286

Query: 303 XXXXXXXXXXSTQKLCQRVTNNKNRIRAFGTRTWEKFFVPSSVKVDNENCKYTRESAFGS 124
                        +L  + +  + R++  G+   ++FF+P S+KVD ENCKY  +S F S
Sbjct: 287 ------------SQLKWKTSRKRRRVKIMGSHACDRFFIPKSLKVDCENCKYVGDSLFSS 334

Query: 123 SVASPLSPLVMSR 85
           SV  PL+ LVMSR
Sbjct: 335 SVVPPLTNLVMSR 347


>ref|XP_002312391.1| predicted protein [Populus trichocarpa] gi|222852211|gb|EEE89758.1|
            predicted protein [Populus trichocarpa]
          Length = 629

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 65/206 (31%), Positives = 91/206 (44%), Gaps = 15/206 (7%)
 Frame = -1

Query: 657  KDSIHVYFPAEKRDTVICCKDLRPSEDWLGIGWKQIEERLDLVTLYFSSLDRKLDTIKSC 478
            +D IHV+FP  K+++V CC DLR S +WLG  WK I+ER D+++   S L+RK  T  S 
Sbjct: 441  EDRIHVFFPGVKKESVFCCSDLRLSLEWLGNAWKHIKERPDILSHLSSCLERKQVTFISD 500

Query: 477  E---------------KGSPPCQSSVCDDKVQVGYKEDKLCQEDILPDSCNIGDKFTXXX 343
            E               K +P C     + ++ +  KE K      LPD     DK     
Sbjct: 501  ESKLAEVAIPGSRQSGKANPECGDYPFESRLDM-RKEVK-----ALPDLSK--DKLLAQL 552

Query: 342  XXXXXXXXXXXXXXXXXXXXXXXSTQKLCQRVTNNKNRIRAFGTRTWEKFFVPSSVKVDN 163
                                      K+              G+   E+F +P+S+KVD+
Sbjct: 553  RWSSIKKRRRGSGSSG---------HKMHHNNNGGLRLSEVVGSNAGERFLIPTSLKVDH 603

Query: 162  ENCKYTRESAFGSSVASPLSPLVMSR 85
            ENCKY  +S F  +V  PL+ LVMSR
Sbjct: 604  ENCKYMGDSLFTCAVVQPLTGLVMSR 629


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