BLASTX nr result

ID: Bupleurum21_contig00036474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036474
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFV15381.1| AGO4A [Solanum lycopersicum]                            69   3e-10
gb|ABC61505.1| AGO4-2, partial [Nicotiana benthamiana]                 69   5e-10
gb|ABC61504.1| AGO4-1, partial [Nicotiana benthamiana]                 66   3e-09
gb|AFV15382.1| AGO4B [Solanum lycopersicum]                            66   3e-09
ref|XP_002880875.1| hypothetical protein ARALYDRAFT_481584 [Arab...    65   6e-09

>gb|AFV15381.1| AGO4A [Solanum lycopersicum]
          Length = 909

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/53 (67%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
 Frame = -1

Query: 157 SVALFNEDDCLIDAKGFGRKVLDCVHDTYIIELEGTDFAYD-DRSLFTFGALP 2
           SVALF ED   +D KG GRKVLD VH+TY  EL G DFAYD ++SLFT GALP
Sbjct: 77  SVALFYEDGRPVDGKGVGRKVLDTVHETYDTELAGKDFAYDGEKSLFTIGALP 129


>gb|ABC61505.1| AGO4-2, partial [Nicotiana benthamiana]
          Length = 905

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/53 (67%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
 Frame = -1

Query: 157 SVALFNEDDCLIDAKGFGRKVLDCVHDTYIIELEGTDFAYD-DRSLFTFGALP 2
           SVALF ED   +D KG GRKVLD VH+TY  EL G DFAYD ++SLFT GALP
Sbjct: 77  SVALFYEDGRPVDGKGVGRKVLDRVHETYDTELAGKDFAYDGEKSLFTIGALP 129


>gb|ABC61504.1| AGO4-1, partial [Nicotiana benthamiana]
          Length = 912

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/53 (64%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
 Frame = -1

Query: 157 SVALFNEDDCLIDAKGFGRKVLDCVHDTYIIELEGTDFAYD-DRSLFTFGALP 2
           SVALF ED   ++ KG GRKVLD VH+TY  EL G DFAYD ++SLFT G+LP
Sbjct: 76  SVALFYEDGRPVEGKGIGRKVLDRVHETYDTELAGKDFAYDGEKSLFTIGSLP 128


>gb|AFV15382.1| AGO4B [Solanum lycopersicum]
          Length = 913

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/53 (64%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
 Frame = -1

Query: 157 SVALFNEDDCLIDAKGFGRKVLDCVHDTYIIELEGTDFAYD-DRSLFTFGALP 2
           SVALF ED   ++ KG GRKVLD VH+TY  EL G DFAYD ++SLFT G+LP
Sbjct: 76  SVALFYEDGRPVEGKGIGRKVLDRVHETYDTELAGKDFAYDGEKSLFTIGSLP 128


>ref|XP_002880875.1| hypothetical protein ARALYDRAFT_481584 [Arabidopsis lyrata subsp.
           lyrata] gi|297326714|gb|EFH57134.1| hypothetical protein
           ARALYDRAFT_481584 [Arabidopsis lyrata subsp. lyrata]
          Length = 924

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/53 (58%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
 Frame = -1

Query: 157 SVALFNEDDCLIDAKGFGRKVLDCVHDTYIIELEGTDFAYD-DRSLFTFGALP 2
           SVALF +D   ++AKG GRK+LD VH+TY  +L+G +FAYD +++LFT+GALP
Sbjct: 91  SVALFYDDGRPVEAKGVGRKILDKVHETYHSDLDGKEFAYDGEKTLFTYGALP 143


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