BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036431
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containi...   196   1e-48
ref|XP_002325369.1| predicted protein [Populus trichocarpa] gi|2...   194   8e-48
ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47
ref|XP_002871814.1| pentatricopeptide repeat-containing protein ...   189   2e-46
ref|NP_197340.1| pentatricopeptide repeat-containing protein [Ar...   187   6e-46

>ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial [Vitis vinifera]
           gi|296085168|emb|CBI28663.3| unnamed protein product
           [Vitis vinifera]
          Length = 454

 Score =  196 bits (499), Expect = 1e-48
 Identities = 91/116 (78%), Positives = 105/116 (90%)
 Frame = -3

Query: 348 YALIRRMLRKGCVPDKRTYSVLVNGWCSAGKMKEAQKFLEEMSQKGFNPPVRGRDLLIDG 169
           YALIRRM+RKG  P+K+TYSVLVNGWC+AGKMKEAQ FLEEMS+KGFNPPVRGRDLL+DG
Sbjct: 197 YALIRRMIRKGVTPNKQTYSVLVNGWCAAGKMKEAQDFLEEMSRKGFNPPVRGRDLLVDG 256

Query: 168 LLNAGYIESAKGLVRKMTKEGFVPDVATFNSLAEAVCKSGESEFCIDIYHAVCRWG 1
           LLNAGY+E+AK +VRKMTKEG  PDV T NS+ EA+CK+GE+EFCIDIY+ VCR G
Sbjct: 257 LLNAGYLEAAKEMVRKMTKEGCAPDVETLNSMLEAICKAGEAEFCIDIYNDVCRLG 312


>ref|XP_002325369.1| predicted protein [Populus trichocarpa] gi|222862244|gb|EEE99750.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  194 bits (492), Expect = 8e-48
 Identities = 86/116 (74%), Positives = 105/116 (90%)
 Frame = -3

Query: 348 YALIRRMLRKGCVPDKRTYSVLVNGWCSAGKMKEAQKFLEEMSQKGFNPPVRGRDLLIDG 169
           YAL+RRM+RKG VPDKRTY VLVNGWCS+GK++EA+ FLEEMS+KGFNPPVRGRDLLI+G
Sbjct: 166 YALVRRMIRKGIVPDKRTYGVLVNGWCSSGKLREAKGFLEEMSKKGFNPPVRGRDLLIEG 225

Query: 168 LLNAGYIESAKGLVRKMTKEGFVPDVATFNSLAEAVCKSGESEFCIDIYHAVCRWG 1
           LLNAGY+ESAK +VR+M KEG VPDV TFNS+ EA+C +GE +FC+D+YH+VC+ G
Sbjct: 226 LLNAGYLESAKDMVRRMMKEGLVPDVNTFNSMVEAICNAGEVDFCVDMYHSVCKLG 281


>ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Cucumis sativus]
           gi|449518358|ref|XP_004166209.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Cucumis sativus]
          Length = 455

 Score =  193 bits (490), Expect = 1e-47
 Identities = 87/116 (75%), Positives = 102/116 (87%)
 Frame = -3

Query: 348 YALIRRMLRKGCVPDKRTYSVLVNGWCSAGKMKEAQKFLEEMSQKGFNPPVRGRDLLIDG 169
           YALIRRM+RKG  PDK+TY  LV GWCSAGKMKEAQ+FLEEMSQKGFNPP+RGRDLL++G
Sbjct: 198 YALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMKEAQEFLEEMSQKGFNPPLRGRDLLVEG 257

Query: 168 LLNAGYIESAKGLVRKMTKEGFVPDVATFNSLAEAVCKSGESEFCIDIYHAVCRWG 1
           LLNAGY+ESAK +VRKMTKEG VPD+ TFNSL + +C SGE +FCI+I+H VC+ G
Sbjct: 258 LLNAGYLESAKDMVRKMTKEGSVPDIGTFNSLIDVICNSGEVDFCINIFHEVCKLG 313


>ref|XP_002871814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317651|gb|EFH48073.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 459

 Score =  189 bits (481), Expect = 2e-46
 Identities = 87/116 (75%), Positives = 103/116 (88%)
 Frame = -3

Query: 348 YALIRRMLRKGCVPDKRTYSVLVNGWCSAGKMKEAQKFLEEMSQKGFNPPVRGRDLLIDG 169
           YALIRRM+RKG  PDKRTY++LVNGWCSAGKMKEAQ+FL+EMS+KGFNPP RGRDLLI+G
Sbjct: 202 YALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRKGFNPPARGRDLLIEG 261

Query: 168 LLNAGYIESAKGLVRKMTKEGFVPDVATFNSLAEAVCKSGESEFCIDIYHAVCRWG 1
           LLNAGY+ESAK +V KMTK GFVPD+ TFN+L EA+ KSGE EFCI++Y+  C+ G
Sbjct: 262 LLNAGYLESAKEIVDKMTKGGFVPDILTFNTLIEAISKSGEVEFCIEMYYTACKLG 317


>ref|NP_197340.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635760|sp|Q94JX6.2|PP391_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g18390, mitochondrial; Flags: Precursor
           gi|332005166|gb|AED92549.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 459

 Score =  187 bits (476), Expect = 6e-46
 Identities = 86/116 (74%), Positives = 102/116 (87%)
 Frame = -3

Query: 348 YALIRRMLRKGCVPDKRTYSVLVNGWCSAGKMKEAQKFLEEMSQKGFNPPVRGRDLLIDG 169
           YALIRRM+RKG  PDKRTY++LVNGWCSAGKMKEAQ+FL+EMS++GFNPP RGRDLLI+G
Sbjct: 202 YALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEG 261

Query: 168 LLNAGYIESAKGLVRKMTKEGFVPDVATFNSLAEAVCKSGESEFCIDIYHAVCRWG 1
           LLNAGY+ESAK +V KMTK GFVPD+ TFN L EA+ KSGE EFCI++Y+  C+ G
Sbjct: 262 LLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLG 317