BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036413
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Rici...   136   2e-30
ref|NP_195908.1| E3 ubiquitin-protein ligase UPL4 [Arabidopsis t...   128   5e-28
ref|XP_002870997.1| ubiquitin-protein ligase 4 [Arabidopsis lyra...   127   1e-27
ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   122   4e-26
ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   122   4e-26

>ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Ricinus communis]
           gi|223535482|gb|EEF37151.1| ubiquitin protein ligase
           E3a, putative [Ricinus communis]
          Length = 1561

 Score =  136 bits (342), Expect = 2e-30
 Identities = 71/128 (55%), Positives = 93/128 (72%)
 Frame = -2

Query: 386 SAYEASDSDGMSDADPRLDEYLDHQQQKSSDNHARLNVIVSNLSGDVDQSAMLAALMELC 207
           SAY + DSD   DA PR     + Q+ +S  +H RL   +SNLS   + S  LAAL +LC
Sbjct: 75  SAYGSCDSD---DAIPRHSSLRNFQRHRSLGDHGRLRNALSNLSEGTEPSGQLAALTDLC 131

Query: 206 DLLSFSTEDSLSTIMVQSLCPIVVRLSREESDPDIMLLSIRAITYLCDAHSRASSCLVKH 27
           ++LSF T+DSLS++M  +L P++VRL+R ES+PD+MLL+IRA+TYLCDA  RASS LV+H
Sbjct: 132 EVLSFCTDDSLSSMMADTLSPVLVRLARHESNPDVMLLAIRALTYLCDACPRASSYLVRH 191

Query: 26  DAVPALCE 3
           DAVP LCE
Sbjct: 192 DAVPVLCE 199


>ref|NP_195908.1| E3 ubiquitin-protein ligase UPL4 [Arabidopsis thaliana]
           gi|75181166|sp|Q9LYZ7.1|UPL4_ARATH RecName: Full=E3
           ubiquitin-protein ligase UPL4; Short=Ubiquitin-protein
           ligase 4 gi|7413563|emb|CAB86042.1| putative protein
           [Arabidopsis thaliana] gi|332003148|gb|AED90531.1| E3
           ubiquitin-protein ligase UPL4 [Arabidopsis thaliana]
          Length = 1502

 Score =  128 bits (321), Expect = 5e-28
 Identities = 62/128 (48%), Positives = 92/128 (71%)
 Frame = -2

Query: 386 SAYEASDSDGMSDADPRLDEYLDHQQQKSSDNHARLNVIVSNLSGDVDQSAMLAALMELC 207
           S Y + DSD   + DPR     D+Q+Q+SS +H +L  ++ NL+G+ D S  L+ L ELC
Sbjct: 79  SDYGSCDSD---EEDPRQRVLQDYQRQRSSGDHGKLKSLLLNLTGETDPSGQLSRLTELC 135

Query: 206 DLLSFSTEDSLSTIMVQSLCPIVVRLSREESDPDIMLLSIRAITYLCDAHSRASSCLVKH 27
           ++LSFSTE+SLS++M   L P++V+L++ E++ DIMLL+IRAITYLCD +  +   LV+H
Sbjct: 136 EVLSFSTEESLSSVMANMLSPVLVKLAKHENNADIMLLAIRAITYLCDVYPPSVEFLVRH 195

Query: 26  DAVPALCE 3
           D +PALC+
Sbjct: 196 DTIPALCQ 203


>ref|XP_002870997.1| ubiquitin-protein ligase 4 [Arabidopsis lyrata subsp. lyrata]
           gi|297316834|gb|EFH47256.1| ubiquitin-protein ligase 4
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1509

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/128 (47%), Positives = 93/128 (72%)
 Frame = -2

Query: 386 SAYEASDSDGMSDADPRLDEYLDHQQQKSSDNHARLNVIVSNLSGDVDQSAMLAALMELC 207
           S Y + DSD   + DPR     D+Q+Q+SS +  +L  ++++L+G+ D S  L+ L ELC
Sbjct: 74  SDYGSCDSD---EEDPRQRVLQDYQRQRSSGDQGKLKSLLASLTGETDPSGQLSELTELC 130

Query: 206 DLLSFSTEDSLSTIMVQSLCPIVVRLSREESDPDIMLLSIRAITYLCDAHSRASSCLVKH 27
           ++LSF TE+SLS++M   L P++V+LS+ E++ DIMLL+IRAITYLCD + R+ + LV+H
Sbjct: 131 EVLSFCTEESLSSVMADMLSPVLVKLSKHENNADIMLLAIRAITYLCDVYPRSVASLVRH 190

Query: 26  DAVPALCE 3
           D +PALC+
Sbjct: 191 DTIPALCQ 198


>ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Vitis vinifera]
          Length = 1575

 Score =  122 bits (305), Expect = 4e-26
 Identities = 65/132 (49%), Positives = 93/132 (70%), Gaps = 4/132 (3%)
 Frame = -2

Query: 386 SAYEASDSDGMSDADPRLDEYL--DHQQQKSSDNHARLNVIVSNLS--GDVDQSAMLAAL 219
           SAY + DSD ++D + R +  +  D Q+++SS + A+   I+  L+   +VD S +LAAL
Sbjct: 79  SAYGSCDSDDLADGELRFNRDILRDFQRRRSSGDQAKFKKILVTLTEADEVDVSGVLAAL 138

Query: 218 MELCDLLSFSTEDSLSTIMVQSLCPIVVRLSREESDPDIMLLSIRAITYLCDAHSRASSC 39
            ELC++LSF TE SLS++ V SL P++V+ ++ ES+PDIMLL+IRAITYLCD   R+S  
Sbjct: 139 TELCEVLSFCTESSLSSLTVDSLAPVLVKHAKHESNPDIMLLAIRAITYLCDVFPRSSGL 198

Query: 38  LVKHDAVPALCE 3
           L +H  VPALCE
Sbjct: 199 LSRHGVVPALCE 210


>ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1557

 Score =  122 bits (305), Expect = 4e-26
 Identities = 64/128 (50%), Positives = 89/128 (69%)
 Frame = -2

Query: 386 SAYEASDSDGMSDADPRLDEYLDHQQQKSSDNHARLNVIVSNLSGDVDQSAMLAALMELC 207
           SAY + DSD M      L EY  H+Q+ SSD H +   I+S+LSG  + S  LA L ELC
Sbjct: 71  SAYGSCDSDDMEQHHSTLHEY--HRQRLSSD-HGKFKTIISSLSGLTEPSLQLAVLTELC 127

Query: 206 DLLSFSTEDSLSTIMVQSLCPIVVRLSREESDPDIMLLSIRAITYLCDAHSRASSCLVKH 27
           ++LSF TE S+S++    L P++V+L++ ES+PDIML SIRAITY+CD + R+++ LV+H
Sbjct: 128 EVLSFCTEGSISSMTSDLLSPLLVKLAQHESNPDIMLFSIRAITYICDLYPRSAAFLVRH 187

Query: 26  DAVPALCE 3
           DAV  LC+
Sbjct: 188 DAVTTLCQ 195