BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036406
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           300   9e-80
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         295   4e-78
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]      282   3e-74
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   267   1e-69
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]            260   1e-67

>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  300 bits (769), Expect = 9e-80
 Identities = 145/196 (73%), Positives = 171/196 (87%)
 Frame = -3

Query: 589  KHGYQKTSTDHCVFIKRFSSTDFIILLLYVDDMLIVGPNKERIASLKQLMNGTFSMKELG 410
            +HGY+KT++DHCVF ++FS  DFIILLLYVDDMLIVG N  RI SLK+ ++  F+MK+LG
Sbjct: 981  QHGYKKTTSDHCVFAQKFSDDDFIILLLYVDDMLIVGRNVSRINSLKEQLSKFFAMKDLG 1040

Query: 409  PAKHILGMQIIRNRKAKRLWLSQEAYINKVLQRFNMEGAKPVSTPLALHFKLSTKQSPST 230
            PAK ILGM+I+R+R+AK+LWLSQE YI KVLQRFNME  K VS PLA HF+LSTKQSPST
Sbjct: 1041 PAKQILGMRIMRDREAKKLWLSQEKYIEKVLQRFNMEKTKAVSCPLANHFRLSTKQSPST 1100

Query: 229  FEEKKNMQRIPYASAVGSLMYAMVCTRPDISHAVGLVSRFLSNPGKEHWNAVKWIMRYLR 50
             +E++ M+RIPYASAVGSLMYAMVCTRPDI+HAVG+VSRFLSNPGKEHW+AVKWI+RYLR
Sbjct: 1101 DDERRKMERIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLR 1160

Query: 49   GTADLKLCFGSDNASL 2
            GT+ L LCFG DN  L
Sbjct: 1161 GTSKLCLCFGEDNPVL 1176


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  295 bits (755), Expect = 4e-78
 Identities = 138/191 (72%), Positives = 167/191 (87%)
 Frame = -3

Query: 589  KHGYQKTSTDHCVFIKRFSSTDFIILLLYVDDMLIVGPNKERIASLKQLMNGTFSMKELG 410
            KHGY+KTS+DHCVF+ R+S  DF+ILLLYVDDMLIVG N  RI  LKQ ++ +FSMK++G
Sbjct: 978  KHGYKKTSSDHCVFVNRYSDDDFVILLLYVDDMLIVGRNASRIQELKQELSKSFSMKDMG 1037

Query: 409  PAKHILGMQIIRNRKAKRLWLSQEAYINKVLQRFNMEGAKPVSTPLALHFKLSTKQSPST 230
            PAK ILGM+IIR+R+ K+LWLSQE YI KVL+RF+M  AKPVSTPL +HFKL  KQ PS+
Sbjct: 1038 PAKQILGMKIIRDRQNKKLWLSQEKYIEKVLERFHMNEAKPVSTPLDMHFKLCKKQCPSS 1097

Query: 229  FEEKKNMQRIPYASAVGSLMYAMVCTRPDISHAVGLVSRFLSNPGKEHWNAVKWIMRYLR 50
             +EK+ MQR+PY+SAVGSLMYAMVCTRPDI+HAVG+VSRFLSNPG+EHW+AVKWI+RYLR
Sbjct: 1098 EKEKEEMQRVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGREHWDAVKWILRYLR 1157

Query: 49   GTADLKLCFGS 17
            GT+ L LCFG+
Sbjct: 1158 GTSSLSLCFGT 1168


>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score =  282 bits (722), Expect = 3e-74
 Identities = 134/196 (68%), Positives = 166/196 (84%)
 Frame = -3

Query: 589  KHGYQKTSTDHCVFIKRFSSTDFIILLLYVDDMLIVGPNKERIASLKQLMNGTFSMKELG 410
            + GY+KT++DHCVF+K+F++ DFIILLLYVDD+LIVG +   I  LK+ ++ +F+MK++G
Sbjct: 924  EQGYKKTTSDHCVFVKKFANDDFIILLLYVDDILIVGKDISMINRLKKQLSESFAMKDMG 983

Query: 409  PAKHILGMQIIRNRKAKRLWLSQEAYINKVLQRFNMEGAKPVSTPLALHFKLSTKQSPST 230
             AK ILG++I+R+R+ K+LWLSQE Y+ +VLQRF ME AK VSTPLA HFKLSTKQSPS 
Sbjct: 984  AAKQILGIRIMRDRQEKKLWLSQENYVKRVLQRFQMENAKVVSTPLATHFKLSTKQSPSY 1043

Query: 229  FEEKKNMQRIPYASAVGSLMYAMVCTRPDISHAVGLVSRFLSNPGKEHWNAVKWIMRYLR 50
              EK +MQRIPYASAVGSLMYAMVCTRPDI+H VG VSRF+SNPG+EHWNAVKWI+RYLR
Sbjct: 1044 EYEKSDMQRIPYASAVGSLMYAMVCTRPDIAHVVGTVSRFMSNPGREHWNAVKWILRYLR 1103

Query: 49   GTADLKLCFGSDNASL 2
            GT  L+LCFG D  +L
Sbjct: 1104 GTTCLRLCFGGDKPTL 1119


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  267 bits (682), Expect = 1e-69
 Identities = 130/193 (67%), Positives = 155/193 (80%)
 Frame = -3

Query: 580  YQKTSTDHCVFIKRFSSTDFIILLLYVDDMLIVGPNKERIASLKQLMNGTFSMKELGPAK 401
            Y KT +D CV+ KRFS  +FIILLLYVDDMLIVG +K  IA LK  ++ +F MK+LGPA+
Sbjct: 983  YLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQ 1042

Query: 400  HILGMQIIRNRKAKRLWLSQEAYINKVLQRFNMEGAKPVSTPLALHFKLSTKQSPSTFEE 221
             ILGM+I+R R +++LWLSQE YI +VL+RFNM+ AKPVSTPLA H KLS K  P+T EE
Sbjct: 1043 QILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEE 1102

Query: 220  KKNMQRIPYASAVGSLMYAMVCTRPDISHAVGLVSRFLSNPGKEHWNAVKWIMRYLRGTA 41
            K NM ++PY+SAVGSLMYAMVCTRPDI+HAVG+VSRFL NPGKEHW AVKWI+RYLRGT 
Sbjct: 1103 KGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTT 1162

Query: 40   DLKLCFGSDNASL 2
               LCFG  +  L
Sbjct: 1163 GDCLCFGGSDPIL 1175


>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score =  260 bits (665), Expect = 1e-67
 Identities = 123/187 (65%), Positives = 155/187 (82%)
 Frame = -3

Query: 580 YQKTSTDHCVFIKRFSSTDFIILLLYVDDMLIVGPNKERIASLKQLMNGTFSMKELGPAK 401
           Y++T+ D CV+ ++FS  +FIIL LYVDDMLIVG + E I  LK+ ++ +F MK+LGPAK
Sbjct: 343 YKRTTADPCVYFRKFSEGNFIILCLYVDDMLIVGQDVEMICRLKEDLSKSFDMKDLGPAK 402

Query: 400 HILGMQIIRNRKAKRLWLSQEAYINKVLQRFNMEGAKPVSTPLALHFKLSTKQSPSTFEE 221
            ILGM+I R+RKA +LWLSQE YI +VL+RFNM+ AKPV+TPLA HFKLS +  P+T +E
Sbjct: 403 QILGMEIARDRKAGKLWLSQENYIERVLERFNMKNAKPVNTPLAAHFKLSKRCCPTTEKE 462

Query: 220 KKNMQRIPYASAVGSLMYAMVCTRPDISHAVGLVSRFLSNPGKEHWNAVKWIMRYLRGTA 41
           K++M  IPY+S VGSLMYAMVCTRPDI+HAVGLVSR+L+NP K HW AVKWI+RYLRGT+
Sbjct: 463 KESMSHIPYSSVVGSLMYAMVCTRPDIAHAVGLVSRYLANPSKVHWEAVKWILRYLRGTS 522

Query: 40  DLKLCFG 20
           +L LCFG
Sbjct: 523 NLSLCFG 529