BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036403
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsi...    83   3e-14
emb|CAN71857.1| hypothetical protein VITISV_012968 [Vitis vinifera]    76   3e-12
emb|CAN80838.1| hypothetical protein VITISV_042541 [Vitis vinifera]    70   1e-10
emb|CAN74139.1| hypothetical protein VITISV_038754 [Vitis vinifera]    70   2e-10
gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...    69   4e-10

>gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 889

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
 Frame = +2

Query: 14  YNAIMGRPWIHEMKAVPSTYHQVIRFPTKWGVAEIKGTPKAARECYSLMLKDKASQAPQV 193
           +NAI+GRPW+H MKAVPSTYHQ I+FP+  G+A + G+ +++R+CY    +D     P V
Sbjct: 150 FNAILGRPWLHVMKAVPSTYHQCIKFPSYKGIAVVYGSQRSSRKCYMGSYEDIKKADPVV 209

Query: 194 NQIEQ--ADLPKSTAEPPMED------LDEVSISDEFPEHKTQIGSRLPTELRVKLIAFL 349
             IE   A++    +  P +       + +V I +  P+    IG  L   +R  LI FL
Sbjct: 210 LMIEDELAEMKTVRSLDPSQRGTRKSLITQVCIDESDPKRCVGIGHDLDLTVREDLITFL 269

Query: 350 KQYHD 364
           K+  D
Sbjct: 270 KENKD 274


>emb|CAN71857.1| hypothetical protein VITISV_012968 [Vitis vinifera]
          Length = 781

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 48/121 (39%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
 Frame = +2

Query: 8   SSYNAIMGRPWIHEMKAVPSTYHQVIRFPTKWGVAEIKGTPKAARECYSLMLKDKASQAP 187
           S +N I+GR W+H MK +PSTY+Q++ F TK G  ++  +  AAR+CY +  +   SQ  
Sbjct: 378 SPFNVILGRTWLHYMKVIPSTYYQMVSFLTKDGQIDLYDSQLAARQCYQIAREAGTSQ-- 435

Query: 188 QVNQIEQADLPKST-AEPPMED-LDEVSISDEFPEHKTQIGSRLPTELRVKLIAFLKQYH 361
                E A LP+S+ A PP  D L  + IS+E   H T I S L  E    +   L+Q H
Sbjct: 436 -----EDASLPESSHAYPPAADPLQAIQISEE-GTHLTNISSLLTPEETRNMQNALRQNH 489

Query: 362 D 364
           D
Sbjct: 490 D 490


>emb|CAN80838.1| hypothetical protein VITISV_042541 [Vitis vinifera]
          Length = 508

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/74 (45%), Positives = 48/74 (64%)
 Frame = +2

Query: 8   SSYNAIMGRPWIHEMKAVPSTYHQVIRFPTKWGVAEIKGTPKAARECYSLMLKDKASQAP 187
           SS+N I+GR W+H MKA+PSTYHQ++ F TK G  ++ G+  AAR+CY +  +   SQ  
Sbjct: 437 SSFNVILGRTWLHYMKAIPSTYHQMVSFLTKDGQIDLYGSQLAARQCYQITRETGTSQ-- 494

Query: 188 QVNQIEQADLPKST 229
                E A LP+S+
Sbjct: 495 -----EDASLPESS 503


>emb|CAN74139.1| hypothetical protein VITISV_038754 [Vitis vinifera]
          Length = 1387

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 44/119 (36%), Positives = 62/119 (52%)
 Frame = +2

Query: 8   SSYNAIMGRPWIHEMKAVPSTYHQVIRFPTKWGVAEIKGTPKAARECYSLMLKDKASQAP 187
           S ++ I+GR W+H MKA+PSTYHQ++ F TK G  ++ G+  AAR+CY         Q  
Sbjct: 442 SPFDVILGRTWLHYMKAIPSTYHQMVSFLTKDGQIDLYGSQLAARQCY---------QIA 492

Query: 188 QVNQIEQADLPKSTAEPPMEDLDEVSISDEFPEHKTQIGSRLPTELRVKLIAFLKQYHD 364
           +   +   D    TA+P    L  + IS+E   H T I S L  E    +   L+Q HD
Sbjct: 493 REQLLSPTDKDPLTADP----LRTIQISEE-DTHLTYISSLLTLEETRNIQDALRQSHD 546


>gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 672

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 29/49 (59%), Positives = 38/49 (77%)
 Frame = +2

Query: 5   PSSYNAIMGRPWIHEMKAVPSTYHQVIRFPTKWGVAEIKGTPKAARECY 151
           P++YN I+G PWI+ MKAVPSTY+Q I+FPT  GV  I+G  +A+R CY
Sbjct: 615 PAAYNIILGTPWIYRMKAVPSTYYQCIKFPTSNGVETIRGDQEASRTCY 663