BLASTX nr result

ID: Bupleurum21_contig00036395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036395
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519704.1| PREDICTED: U-box domain-containing protein 4...   139   2e-31
ref|XP_003536205.1| PREDICTED: U-box domain-containing protein 4...   136   2e-30
ref|XP_002283969.2| PREDICTED: U-box domain-containing protein 4...   125   5e-27
ref|XP_002314659.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
gb|ABK94871.1| unknown [Populus trichocarpa]                          122   3e-26

>ref|XP_003519704.1| PREDICTED: U-box domain-containing protein 43-like [Glycine max]
          Length = 1018

 Score =  139 bits (351), Expect = 2e-31
 Identities = 75/133 (56%), Positives = 94/133 (70%)
 Frame = +1

Query: 1    VNKSFCLLSANALPHLVKLLQEEVHATAFEAIQTLSTLVSEECPQRGAKVLYDSGAIAHT 180
            V+ +FCLL ANALP L++LL  EVHATA+EAIQTLSTLV E+ PQRGA+VL++S A+   
Sbjct: 878  VSSTFCLLEANALPGLIRLLHGEVHATAYEAIQTLSTLVLEDFPQRGARVLHESNAMRPL 937

Query: 181  LEILTWXXXXXXXXXXXXXXXXFMSKEMVEAYGLTARVNLVRLTGRSTHEDGHLQRKAAR 360
            LEIL W                F+SKEMVE YG  AR++L+ LTG + + DGHL+RKAAR
Sbjct: 938  LEILNWGTDSLKSEAIGLLEKVFVSKEMVEYYGTRARLSLLGLTGITVYGDGHLRRKAAR 997

Query: 361  VLLLIERNSRPLS 399
            VL L+ER S+  S
Sbjct: 998  VLSLLERYSKSSS 1010


>ref|XP_003536205.1| PREDICTED: U-box domain-containing protein 44-like [Glycine max]
          Length = 1014

 Score =  136 bits (343), Expect = 2e-30
 Identities = 76/139 (54%), Positives = 95/139 (68%)
 Frame = +1

Query: 1    VNKSFCLLSANALPHLVKLLQEEVHATAFEAIQTLSTLVSEECPQRGAKVLYDSGAIAHT 180
            VN +FCLL A ALP L+KLL  EVHATA EAIQTLSTLV E+ PQRGA+VL++  AI   
Sbjct: 874  VNTTFCLLEAKALPGLIKLLHGEVHATACEAIQTLSTLVLEDFPQRGARVLHEYNAIRSI 933

Query: 181  LEILTWXXXXXXXXXXXXXXXXFMSKEMVEAYGLTARVNLVRLTGRSTHEDGHLQRKAAR 360
            ++IL W                F+SKEMVE YG TAR  L+ LTG + + DGHL+RKAA+
Sbjct: 934  MDILNWGTDSLKAEALGLLEKVFVSKEMVEYYGTTARSRLIGLTGMNIYGDGHLRRKAAK 993

Query: 361  VLLLIERNSRPLSFSAAVT 417
            VL L+ER S+  S S+A++
Sbjct: 994  VLSLLERYSK--SSSSAIS 1010


>ref|XP_002283969.2| PREDICTED: U-box domain-containing protein 43-like [Vitis vinifera]
          Length = 1016

 Score =  125 bits (313), Expect = 5e-27
 Identities = 72/130 (55%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
 Frame = +1

Query: 1    VNKSFCLLSANALPHLVKLLQEEVHATAFEAIQTLSTLVSEECPQRGAKVLYDSGAIAHT 180
            V  +FCLL A+AL  LV LL EE+ ATA+EAIQTLSTLV E+ PQRGA VL+++ AI  T
Sbjct: 874  VETTFCLLKADALAGLVALLHEEIDATAYEAIQTLSTLVREDSPQRGANVLHEADAINPT 933

Query: 181  LEILTWXXXXXXXXXXXXXXXXFMSKEMVEAYGLTARVNLVRLTGR-STHEDGHLQRKAA 357
            LEIL W                   KEMVE YG  AR+ LV +TGR + HEDG+L+RKAA
Sbjct: 934  LEILNWGPGPLKEQALVLLEKVLTVKEMVEKYGSIARLRLVDITGRINIHEDGNLRRKAA 993

Query: 358  RVLLLIERNS 387
             VL L+ER S
Sbjct: 994  GVLALLERYS 1003


>ref|XP_002314659.1| predicted protein [Populus trichocarpa] gi|222863699|gb|EEF00830.1|
            predicted protein [Populus trichocarpa]
          Length = 1032

 Score =  122 bits (306), Expect = 3e-26
 Identities = 67/130 (51%), Positives = 83/130 (63%)
 Frame = +1

Query: 1    VNKSFCLLSANALPHLVKLLQEEVHATAFEAIQTLSTLVSEECPQRGAKVLYDSGAIAHT 180
            V  +FCL+ A ALP LVKLLQ EVH  A EAIQTLSTLV E  P RGA VL+++ AI   
Sbjct: 892  VKTTFCLIEATALPVLVKLLQGEVHVIAHEAIQTLSTLVQEGSPNRGANVLHEADAIKPV 951

Query: 181  LEILTWXXXXXXXXXXXXXXXXFMSKEMVEAYGLTARVNLVRLTGRSTHEDGHLQRKAAR 360
            L+I TW                F+S+EMVE YG +AR+ LV + GR+ HED  + R+ A+
Sbjct: 952  LDIFTWGTDSLKEEALGLLEKVFLSREMVEHYGPSARLILVGMPGRNGHEDSRMGRRVAK 1011

Query: 361  VLLLIERNSR 390
            VL L+ER SR
Sbjct: 1012 VLSLLERYSR 1021


>gb|ABK94871.1| unknown [Populus trichocarpa]
          Length = 660

 Score =  122 bits (306), Expect = 3e-26
 Identities = 67/130 (51%), Positives = 83/130 (63%)
 Frame = +1

Query: 1   VNKSFCLLSANALPHLVKLLQEEVHATAFEAIQTLSTLVSEECPQRGAKVLYDSGAIAHT 180
           V  +FCL+ A ALP LVKLLQ EVH  A EAIQTLSTLV E  P RGA VL+++ AI   
Sbjct: 520 VKTTFCLIEATALPVLVKLLQGEVHVIAHEAIQTLSTLVQEGSPNRGANVLHEADAIKPV 579

Query: 181 LEILTWXXXXXXXXXXXXXXXXFMSKEMVEAYGLTARVNLVRLTGRSTHEDGHLQRKAAR 360
           L+I TW                F+S+EMVE YG +AR+ LV + GR+ HED  + R+ A+
Sbjct: 580 LDIFTWGTDSLKEEALGLLEKVFLSREMVEHYGPSARLILVGMPGRNGHEDSRMGRRVAK 639

Query: 361 VLLLIERNSR 390
           VL L+ER SR
Sbjct: 640 VLSLLERYSR 649


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