BLASTX nr result

ID: Bupleurum21_contig00036387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036387
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268738.1| PREDICTED: two-component response regulator ...   124   1e-26
ref|NP_850864.1| response regulator 24 [Arabidopsis thaliana] gi...   112   2e-23
ref|XP_002269033.1| PREDICTED: two-component response regulator ...   112   2e-23
ref|XP_002325362.1| extra response regulator [Populus trichocarp...   111   7e-23
ref|XP_002313833.1| extra response regulator [Populus trichocarp...   111   7e-23

>ref|XP_002268738.1| PREDICTED: two-component response regulator ARR22 [Vitis vinifera]
          Length = 130

 Score =  124 bits (310), Expect = 1e-26
 Identities = 64/114 (56%), Positives = 86/114 (75%)
 Frame = +2

Query: 2   VTALIVNDDQLIRRISTVLVSKFGFKTVSVENGKKAVDLYDSGASFNLIVMDMEMPIMNG 181
           ++ LIV+DD L RRI  VL++K G +T +VENGK+AVDLY SGASF+LI+MD+EMPIM+G
Sbjct: 11  ISTLIVDDDPLTRRIHKVLLTKVGLETQAVENGKEAVDLYRSGASFDLILMDLEMPIMDG 70

Query: 182 IQATKRLREMGVKCKIIGVTANTVESEKQKFIDAGLDY*FQKHLTADKLAYTIK 343
            +ATK LR MGV+  I+GVTA  +E EKQ F+ +GLD  + K LT D +   ++
Sbjct: 71  PKATKELRAMGVQSMIVGVTARDLEVEKQMFMASGLDDCYVKPLTTDTVTALVE 124


>ref|NP_850864.1| response regulator 24 [Arabidopsis thaliana]
           gi|332006174|gb|AED93557.1| response regulator 24
           [Arabidopsis thaliana]
          Length = 139

 Score =  112 bits (281), Expect = 2e-23
 Identities = 58/109 (53%), Positives = 81/109 (74%)
 Frame = +2

Query: 2   VTALIVNDDQLIRRISTVLVSKFGFKTVSVENGKKAVDLYDSGASFNLIVMDMEMPIMNG 181
           +TAL+V+D  + + I   L+++ G K   V NGK+AVD+Y SG +++LI+MDM+MPIMNG
Sbjct: 18  LTALVVDDSFVNQTIHQKLLNRLGIKNDVVTNGKEAVDVYCSGGNYDLILMDMDMPIMNG 77

Query: 182 IQATKRLREMGVKCKIIGVTANTVESEKQKFIDAGLDY*FQKHLTADKL 328
           IQATKRLREMG++ KI GVT    E EK++F++AGL+   +K LT  KL
Sbjct: 78  IQATKRLREMGIESKIAGVTTRANEGEKKEFMEAGLNDFQEKPLTISKL 126


>ref|XP_002269033.1| PREDICTED: two-component response regulator ARR22 [Vitis vinifera]
           gi|296085160|emb|CBI28655.3| unnamed protein product
           [Vitis vinifera]
          Length = 140

 Score =  112 bits (281), Expect = 2e-23
 Identities = 57/109 (52%), Positives = 80/109 (73%)
 Frame = +2

Query: 2   VTALIVNDDQLIRRISTVLVSKFGFKTVSVENGKKAVDLYDSGASFNLIVMDMEMPIMNG 181
           ++ LIV DD LI++I  V+++KFG +   V NGK+ VDLY SGASF+LI+MD EMPIM+G
Sbjct: 22  ISVLIVEDDPLIQKIHKVMMAKFGTEVQVVANGKEVVDLYRSGASFDLILMDFEMPIMDG 81

Query: 182 IQATKRLREMGVKCKIIGVTANTVESEKQKFIDAGLDY*FQKHLTADKL 328
            +ATK LR MGV   I+GVT+ + +SE Q F+ +GL+  + K L A+K+
Sbjct: 82  FEATKELRSMGVTSMIVGVTSRSQDSEIQAFMKSGLNACYVKPLNAEKV 130


>ref|XP_002325362.1| extra response regulator [Populus trichocarpa]
           gi|222862237|gb|EEE99743.1| extra response regulator
           [Populus trichocarpa]
          Length = 138

 Score =  111 bits (277), Expect = 7e-23
 Identities = 57/109 (52%), Positives = 79/109 (72%)
 Frame = +2

Query: 5   TALIVNDDQLIRRISTVLVSKFGFKTVSVENGKKAVDLYDSGASFNLIVMDMEMPIMNGI 184
           T L+V+DD ++R +  +LV+  G K    +NGK+AVDL+ +GASF+LI+MDMEMPIMNG 
Sbjct: 21  TVLVVDDDTVVRMVHRMLVTSLGLKVQEAKNGKEAVDLHINGASFDLILMDMEMPIMNGP 80

Query: 185 QATKRLREMGVKCKIIGVTANTVESEKQKFIDAGLDY*FQKHLTADKLA 331
            AT+ LR MGVK  IIGVT+ T ES  + F++AGL++   K LT  ++A
Sbjct: 81  TATRELRAMGVKSTIIGVTSCTFESVHKDFMEAGLNHCVAKPLTIAQIA 129


>ref|XP_002313833.1| extra response regulator [Populus trichocarpa]
           gi|222850241|gb|EEE87788.1| extra response regulator
           [Populus trichocarpa]
          Length = 129

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/109 (49%), Positives = 82/109 (75%)
 Frame = +2

Query: 2   VTALIVNDDQLIRRISTVLVSKFGFKTVSVENGKKAVDLYDSGASFNLIVMDMEMPIMNG 181
           +TAL+V+DD++I+ I + L+SK G +     NG++AVDL+ SG  F+LIVMD +MPIMNG
Sbjct: 10  ITALVVDDDRIIKTIHSKLLSKLGIENQVAANGEEAVDLHCSGKKFDLIVMDRDMPIMNG 69

Query: 182 IQATKRLREMGVKCKIIGVTANTVESEKQKFIDAGLDY*FQKHLTADKL 328
           I+AT+ LR +G++  I+GV+  ++E E Q+F+DAGLD   +K LT+ K+
Sbjct: 70  IEATRELRALGIRSIIVGVSTRSLEQEIQEFMDAGLDDYQEKPLTSSKV 118


Top