BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036380
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containi...   241   4e-62
ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containi...   241   4e-62
ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containi...   241   4e-62
ref|XP_003595556.1| Pentatricopeptide repeat protein [Medicago t...   207   7e-52
ref|XP_002302824.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38

>ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 706

 Score =  241 bits (615), Expect = 4e-62
 Identities = 110/159 (69%), Positives = 133/159 (83%)
 Frame = +1

Query: 1   VNTAFLASYAKCGCIEMAQKLFEEEEFINKDVIAWNSMIGAYSKHGNWLQCFKMYTQLKL 180
           +NTA L +YAKCG IEMAQ+LFEEE+  +KD+I WNSMI A++ HG+W QCFK+Y ++K 
Sbjct: 449 LNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKC 508

Query: 181 TNLKPDQVTFLSILTACVNSGSVNEGWECFKEMTERYGCQPKEEHYACMVDLLGRAGRVK 360
           +N KPDQVTFL +LTACVNSG V +G E FKEMTE YGCQP +EHYACMV+LLGRAG + 
Sbjct: 509 SNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLIS 568

Query: 361 EALDLIKSMPFKPDARVWGPLLSACKLHPDMKVAELAAE 477
           EA +L+K+MP KPDARVWGPLLSACK+HP  K+AE AAE
Sbjct: 569 EAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAE 607


>ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 607

 Score =  241 bits (615), Expect = 4e-62
 Identities = 110/159 (69%), Positives = 133/159 (83%)
 Frame = +1

Query: 1   VNTAFLASYAKCGCIEMAQKLFEEEEFINKDVIAWNSMIGAYSKHGNWLQCFKMYTQLKL 180
           +NTA L +YAKCG IEMAQ+LFEEE+  +KD+I WNSMI A++ HG+W QCFK+Y ++K 
Sbjct: 350 LNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKC 409

Query: 181 TNLKPDQVTFLSILTACVNSGSVNEGWECFKEMTERYGCQPKEEHYACMVDLLGRAGRVK 360
           +N KPDQVTFL +LTACVNSG V +G E FKEMTE YGCQP +EHYACMV+LLGRAG + 
Sbjct: 410 SNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLIS 469

Query: 361 EALDLIKSMPFKPDARVWGPLLSACKLHPDMKVAELAAE 477
           EA +L+K+MP KPDARVWGPLLSACK+HP  K+AE AAE
Sbjct: 470 EAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAE 508


>ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 722

 Score =  241 bits (615), Expect = 4e-62
 Identities = 110/159 (69%), Positives = 133/159 (83%)
 Frame = +1

Query: 1   VNTAFLASYAKCGCIEMAQKLFEEEEFINKDVIAWNSMIGAYSKHGNWLQCFKMYTQLKL 180
           +NTA L +YAKCG IEMAQ+LFEEE+  +KD+I WNSMI A++ HG+W QCFK+Y ++K 
Sbjct: 465 LNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKC 524

Query: 181 TNLKPDQVTFLSILTACVNSGSVNEGWECFKEMTERYGCQPKEEHYACMVDLLGRAGRVK 360
           +N KPDQVTFL +LTACVNSG V +G E FKEMTE YGCQP +EHYACMV+LLGRAG + 
Sbjct: 525 SNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLIS 584

Query: 361 EALDLIKSMPFKPDARVWGPLLSACKLHPDMKVAELAAE 477
           EA +L+K+MP KPDARVWGPLLSACK+HP  K+AE AAE
Sbjct: 585 EAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAE 623


>ref|XP_003595556.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355484604|gb|AES65807.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 1040

 Score =  207 bits (527), Expect = 7e-52
 Identities = 100/160 (62%), Positives = 124/160 (77%), Gaps = 1/160 (0%)
 Frame = +1

Query: 1   VNTAFLASYAKCGCIEMAQKLFEEEEFINKDVIAWNSMIGAYSKHGNWLQCFKMYTQLKL 180
           + T+ L SYAKCGCIEMA+KLF EE+   KD++AWNSMI AYS HG W QCF++Y Q+KL
Sbjct: 456 LKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHGEWFQCFELYNQIKL 515

Query: 181 TNLKPDQVTFLSILTACVNSGSVNEGWECFKEMTERYGCQPKEEHYACMVDLLGRAGRVK 360
           + +KPD VTFL +LTACVNSG V++G E FKEM + YG QP +EH ACMVDLLGRAG++ 
Sbjct: 516 SIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEMVDIYGFQPSKEHNACMVDLLGRAGKID 575

Query: 361 EALDLIKSMPFKPDARVWGPLLSACKLHP-DMKVAELAAE 477
           EA  +I++     DARV+GPLLSACK+H  +   AELAAE
Sbjct: 576 EARKIIETNQLNSDARVYGPLLSACKMHGLETDFAELAAE 615


>ref|XP_002302824.1| predicted protein [Populus trichocarpa] gi|222844550|gb|EEE82097.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score =  161 bits (407), Expect = 6e-38
 Identities = 73/158 (46%), Positives = 108/158 (68%)
 Frame = +1

Query: 1   VNTAFLASYAKCGCIEMAQKLFEEEEFINKDVIAWNSMIGAYSKHGNWLQCFKMYTQLKL 180
           V TA +  Y KCG +  A+K+F+  +   +++I W++MI  Y  HG   +   ++ Q+K 
Sbjct: 247 VETALIDLYVKCGSLTYARKVFDGMQ--ERNIITWSAMISGYGMHGWGREALNLFDQMK- 303

Query: 181 TNLKPDQVTFLSILTACVNSGSVNEGWECFKEMTERYGCQPKEEHYACMVDLLGRAGRVK 360
            ++KPD +TF+SIL+AC +SG V EGWECF  M   +G  P+ EHYACMVD+LGRAG++ 
Sbjct: 304 ASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLD 363

Query: 361 EALDLIKSMPFKPDARVWGPLLSACKLHPDMKVAELAA 474
           EA D I+ MP +P+A VWG LL AC++H ++ +AE+ A
Sbjct: 364 EACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVA 401



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 38/183 (20%)
 Frame = +1

Query: 1   VNTAFLASYAKCGCIEMAQKLFEEEEFINKDVIAWNSMIGAYSKHGNWLQCFKMYTQLKL 180
           V +A    +A+CG +E+A+KLF+    ++KD++ W + I AY K    L+   +  Q+ L
Sbjct: 145 VQSAAAGMFARCGRVEVARKLFDG--IMSKDLVTWATTIEAYVKADMPLEALGLLKQMML 202

Query: 181 TNLKPDQVTFLSILTAC------------------------------------VNSGSVN 252
             + PD +T L ++ AC                                    V  GS+ 
Sbjct: 203 QGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLT 262

Query: 253 EGWECFKEMTERYGCQPKEEHYACMVDLLGRAGRVKEALDLIKSM--PFKPDARVWGPLL 426
              + F  M ER         ++ M+   G  G  +EAL+L   M    KPD   +  +L
Sbjct: 263 YARKVFDGMQER-----NIITWSAMISGYGMHGWGREALNLFDQMKASVKPDHITFVSIL 317

Query: 427 SAC 435
           SAC
Sbjct: 318 SAC 320