BLASTX nr result

ID: Bupleurum21_contig00036370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036370
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274666.1| PREDICTED: uncharacterized protein LOC100251...   126   2e-27
emb|CAN60219.1| hypothetical protein VITISV_011848 [Vitis vinifera]   126   2e-27
ref|XP_002528407.1| hypothetical protein RCOM_1406750 [Ricinus c...   122   3e-26
emb|CBI36557.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_002308413.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_002274666.1| PREDICTED: uncharacterized protein LOC100251975 [Vitis vinifera]
          Length = 517

 Score =  126 bits (317), Expect = 2e-27
 Identities = 73/141 (51%), Positives = 92/141 (65%), Gaps = 2/141 (1%)
 Frame = +3

Query: 105 YNELDVXXXXXXXXXXXXXXMILRLQGEKAAVKMEAEHYKRLAEEKMCYAEEKMCYAEES 284
           Y+ELD               MILRLQGEKAAVKMEA  YKR+AEE+MC+AE+       S
Sbjct: 33  YSELDEEREASATAASETLSMILRLQGEKAAVKMEASQYKRMAEERMCHAEK-------S 85

Query: 285 IRIFEDIIYQKEMEIASLDCQVQACRYKLLSLGCDDLRVGEPEIPEN-LIHKNETLIGET 461
           + +FE++IYQKEMEIASL+ QVQA R KLLS+G  D   G+   P+N L+ +NE+L+G+T
Sbjct: 86  LSLFEELIYQKEMEIASLEFQVQAYRCKLLSMGYSDPVAGDTRFPDNLLLQRNESLVGDT 145

Query: 462 IARSISRR-NSAPPVPFKFSY 521
               I RR NS P +  K SY
Sbjct: 146 SVNDIVRRSNSLPSIRLKDSY 166


>emb|CAN60219.1| hypothetical protein VITISV_011848 [Vitis vinifera]
          Length = 488

 Score =  126 bits (317), Expect = 2e-27
 Identities = 73/141 (51%), Positives = 92/141 (65%), Gaps = 2/141 (1%)
 Frame = +3

Query: 105 YNELDVXXXXXXXXXXXXXXMILRLQGEKAAVKMEAEHYKRLAEEKMCYAEEKMCYAEES 284
           Y+ELD               MILRLQGEKAAVKMEA  YKR+AEE+MC+AE+       S
Sbjct: 33  YSELDEEREASATAASETLSMILRLQGEKAAVKMEASQYKRMAEERMCHAEK-------S 85

Query: 285 IRIFEDIIYQKEMEIASLDCQVQACRYKLLSLGCDDLRVGEPEIPEN-LIHKNETLIGET 461
           + +FE++IYQKEMEIASL+ QVQA R KLLS+G  D   G+   P+N L+ +NE+L+G+T
Sbjct: 86  LSLFEELIYQKEMEIASLEFQVQAYRCKLLSMGYSDPVAGDTRFPDNLLLQRNESLVGDT 145

Query: 462 IARSISRR-NSAPPVPFKFSY 521
               I RR NS P +  K SY
Sbjct: 146 SVNDIVRRXNSLPSIRLKDSY 166


>ref|XP_002528407.1| hypothetical protein RCOM_1406750 [Ricinus communis]
           gi|223532195|gb|EEF34000.1| hypothetical protein
           RCOM_1406750 [Ricinus communis]
          Length = 476

 Score =  122 bits (307), Expect = 3e-26
 Identities = 73/136 (53%), Positives = 90/136 (66%), Gaps = 2/136 (1%)
 Frame = +3

Query: 111 ELDVXXXXXXXXXXXXXXMILRLQGEKAAVKMEAEHYKRLAEEKMCYAEEKMCYAEESIR 290
           ELDV              MILRLQGEKA++KMEA  YKR+AEEKMC+AEE       ++ 
Sbjct: 34  ELDVEREAAGSAASEALSMILRLQGEKASLKMEASQYKRMAEEKMCHAEE-------ALA 86

Query: 291 IFEDIIYQKEMEIASLDCQVQACRYKLLSLGCDDLRVGEPEIPENLI-HKNETLIGETIA 467
           +FED+IYQ+EMEIASL+ QVQA RY+LLS+G +DL V E   PENL+  +N+TL  E   
Sbjct: 87  VFEDLIYQREMEIASLEFQVQAYRYRLLSMGFNDLGVYENRFPENLLMQRNDTLFMEKGV 146

Query: 468 RSISRR-NSAPPVPFK 512
            S +RR NS P V  K
Sbjct: 147 NSNARRVNSLPQVAVK 162


>emb|CBI36557.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  120 bits (301), Expect = 1e-25
 Identities = 68/135 (50%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
 Frame = +3

Query: 105 YNELDVXXXXXXXXXXXXXXMILRLQGEKAAVKMEAEHYKRLAEEKMCYAEEKMCYAEES 284
           Y+ELD               MILRLQGEKAAVKMEA  YKR+AEE+MC+AE+       S
Sbjct: 33  YSELDEEREASATAASETLSMILRLQGEKAAVKMEASQYKRMAEERMCHAEK-------S 85

Query: 285 IRIFEDIIYQKEMEIASLDCQVQACRYKLLSLGCDDLRVGEPEIPEN-LIHKNETLIGET 461
           + +FE++IYQKEMEIASL+ QVQA R KLLS+G  D   G+   P+N L+ +NE+L+G+T
Sbjct: 86  LSLFEELIYQKEMEIASLEFQVQAYRCKLLSMGYSDPVAGDTRFPDNLLLQRNESLVGDT 145

Query: 462 IARSISRRNSAPPVP 506
            A     R+  P +P
Sbjct: 146 SAIIERERSMIPLIP 160


>ref|XP_002308413.1| predicted protein [Populus trichocarpa] gi|222854389|gb|EEE91936.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score =  119 bits (298), Expect = 3e-25
 Identities = 69/135 (51%), Positives = 88/135 (65%), Gaps = 2/135 (1%)
 Frame = +3

Query: 105 YNELDVXXXXXXXXXXXXXXMILRLQGEKAAVKMEAEHYKRLAEEKMCYAEEKMCYAEES 284
           Y ELD               MILRLQGEKA++K+EA  YKR+ EEKMC+AEE       +
Sbjct: 63  YTELDEEREASASAASEALSMILRLQGEKASLKLEASQYKRMEEEKMCHAEE-------A 115

Query: 285 IRIFEDIIYQKEMEIASLDCQVQACRYKLLSLGCDDLRVGEPEIPENLI-HKNETLIGET 461
           + + ED+IYQ+E+EIASL+ QVQA RY+LLS+GC+DL V E   PENL+  +NE L G +
Sbjct: 116 LAVVEDLIYQRELEIASLEYQVQAYRYRLLSMGCNDLGVYENSFPENLLMQRNEPLSGNS 175

Query: 462 IARSISRR-NSAPPV 503
            A    RR NS+P V
Sbjct: 176 GANGNLRRFNSSPQV 190


Top