BLASTX nr result
ID: Bupleurum21_contig00036366
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00036366 (405 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28908.3| unnamed protein product [Vitis vinifera] 236 1e-60 ref|XP_002329409.1| predicted protein [Populus trichocarpa] gi|2... 228 5e-58 ref|XP_002532772.1| pentatricopeptide repeat-containing protein,... 221 6e-56 ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containi... 219 2e-55 ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containi... 219 2e-55 >emb|CBI28908.3| unnamed protein product [Vitis vinifera] Length = 658 Score = 236 bits (602), Expect = 1e-60 Identities = 112/135 (82%), Positives = 122/135 (90%) Frame = -1 Query: 405 LGKAGRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQT 226 LGKAGRVDEA+K FE+M+ RGCPQDS+CYNALIDAL KSGK++EAL L +RME EGCDQT Sbjct: 445 LGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQT 504 Query: 225 VYTYTILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILD 46 VYTYTILI GLFK RNEEALK WD+MIDKGITPTTASFR LS GLCLSGKV RACKILD Sbjct: 505 VYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILD 564 Query: 45 ELAPMGIIPETAFEE 1 ELAPMG+IPETAFE+ Sbjct: 565 ELAPMGVIPETAFED 579 Score = 80.5 bits (197), Expect = 1e-13 Identities = 44/126 (34%), Positives = 71/126 (56%) Frame = -1 Query: 405 LGKAGRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQT 226 L K GR E +FE+M +GC + Y ALIDA K+G V+EA+ L +RM+ EG + Sbjct: 340 LCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPD 399 Query: 225 VYTYTILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILD 46 TY ++++GL K+ R +EA+++++ D + + L GL +G+V A K + Sbjct: 400 DVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFE 459 Query: 45 ELAPMG 28 E+ G Sbjct: 460 EMVERG 465 Score = 65.1 bits (157), Expect = 6e-09 Identities = 34/116 (29%), Positives = 55/116 (47%) Frame = -1 Query: 393 GRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQTVYTY 214 G D L+++M RG Y+ +I L K G+ E ++ + M +GC V Y Sbjct: 309 GNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIY 368 Query: 213 TILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILD 46 T LID K EA+ ++ M +G P ++ V+ GLC SG++ A + + Sbjct: 369 TALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFE 424 >ref|XP_002329409.1| predicted protein [Populus trichocarpa] gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa] Length = 599 Score = 228 bits (580), Expect = 5e-58 Identities = 106/135 (78%), Positives = 120/135 (88%) Frame = -1 Query: 405 LGKAGRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQT 226 LGKAGRV EA+KLFE+M+ +GCP DS+CYNALIDAL K GK DEALA +RMEDEGCDQT Sbjct: 387 LGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQT 446 Query: 225 VYTYTILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILD 46 VYTYTI+I+GLF+ +NEEALK WDMMIDKGITPT A+FR LS GLCLSGKV RACK+LD Sbjct: 447 VYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLD 506 Query: 45 ELAPMGIIPETAFEE 1 ELAPMG+IPETAFE+ Sbjct: 507 ELAPMGVIPETAFED 521 Score = 77.4 bits (189), Expect = 1e-12 Identities = 42/131 (32%), Positives = 72/131 (54%) Frame = -1 Query: 405 LGKAGRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQT 226 L K G+ E +FE MI +GC + Y ALID+ K G + EA+ L +RM+ EG + Sbjct: 282 LCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPD 341 Query: 225 VYTYTILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILD 46 V TY ++++ + K+ R +EA+++ + G+ + L GL +G+V A K+ + Sbjct: 342 VVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFE 401 Query: 45 ELAPMGIIPET 13 E+ G P++ Sbjct: 402 EMVKKGCPPDS 412 Score = 58.9 bits (141), Expect = 4e-07 Identities = 34/116 (29%), Positives = 55/116 (47%) Frame = -1 Query: 393 GRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQTVYTY 214 G D L+ +M G Y+ +I L K GK E A+ ++M +GC V Y Sbjct: 251 GDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIY 310 Query: 213 TILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILD 46 T LID K EA+ ++ M +G+ P ++ V+ +C SG++ A + L+ Sbjct: 311 TALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLE 366 >ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 647 Score = 221 bits (562), Expect = 6e-56 Identities = 102/135 (75%), Positives = 120/135 (88%) Frame = -1 Query: 405 LGKAGRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQT 226 LGK+GRVDEA+++F +M+ +GCP DS+CYNALIDAL K GK+DEALAL +RME +GCDQT Sbjct: 434 LGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQT 493 Query: 225 VYTYTILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILD 46 VYTYTILI GLF+ RNEEAL WD+MIDKGITPT A+FR LSTGLCLSGKV RACKILD Sbjct: 494 VYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILD 553 Query: 45 ELAPMGIIPETAFEE 1 E+APMG+IPETAF++ Sbjct: 554 EMAPMGVIPETAFDD 568 Score = 80.9 bits (198), Expect = 1e-13 Identities = 45/131 (34%), Positives = 73/131 (55%) Frame = -1 Query: 405 LGKAGRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQT 226 L K G+ E +FE+MI++GC + Y ALID+ K G + EA+ L +RM+ EG + Sbjct: 329 LCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPD 388 Query: 225 VYTYTILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILD 46 TY ++++ L K+ R +EAL++ + KG+ + L GL SG+V A +I Sbjct: 389 EVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFY 448 Query: 45 ELAPMGIIPET 13 E+ G P++ Sbjct: 449 EMVKKGCPPDS 459 Score = 67.8 bits (164), Expect = 9e-10 Identities = 38/113 (33%), Positives = 58/113 (51%) Frame = -1 Query: 399 KAGRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQTVY 220 K G + EA LF+ M G D Y ++++L KSG++DEAL ++ +G Sbjct: 366 KCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAM 425 Query: 219 TYTILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRA 61 Y+ LIDGL K+ R +EA + + M+ KG P + + L L GK+ A Sbjct: 426 FYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEA 478 Score = 58.9 bits (141), Expect = 4e-07 Identities = 35/129 (27%), Positives = 57/129 (44%) Frame = -1 Query: 393 GRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQTVYTY 214 G D L+ +M +G Y+ +I L K GK E + + M +GC V Y Sbjct: 298 GDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIY 357 Query: 213 TILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILDELAP 34 T LID K EA+ + M +G+ P ++ V+ LC SG++ A + ++ + Sbjct: 358 TALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSG 417 Query: 33 MGIIPETAF 7 G+ F Sbjct: 418 KGVAVNAMF 426 >ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560, mitochondrial-like [Cucumis sativus] Length = 653 Score = 219 bits (557), Expect = 2e-55 Identities = 101/135 (74%), Positives = 119/135 (88%) Frame = -1 Query: 405 LGKAGRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQT 226 LGKAGR+++A+ LFE+M +GC +DS+CYNA+IDAL K GK+D+ALAL RME+EGCDQT Sbjct: 440 LGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQT 499 Query: 225 VYTYTILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILD 46 VYT+TILIDGLFK +NEEA+KFWD MIDKGITPT ASFR L+ GLCL GKV RACKILD Sbjct: 500 VYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILD 559 Query: 45 ELAPMGIIPETAFEE 1 +LAPMGIIPETAFE+ Sbjct: 560 DLAPMGIIPETAFED 574 Score = 78.2 bits (191), Expect = 7e-13 Identities = 40/126 (31%), Positives = 73/126 (57%) Frame = -1 Query: 405 LGKAGRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQT 226 L K + EA +FE M +GC + Y ALID+ K+G ++EA+ L +RM++EG + Sbjct: 335 LCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPD 394 Query: 225 VYTYTILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILD 46 TY++L++GL K+ R ++ ++ +D +KG+ + L GL +G++ A + + Sbjct: 395 AVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFE 454 Query: 45 ELAPMG 28 E++ G Sbjct: 455 EMSEKG 460 Score = 72.0 bits (175), Expect = 5e-11 Identities = 43/126 (34%), Positives = 64/126 (50%) Frame = -1 Query: 405 LGKAGRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQT 226 L K G++D+A LF M GC Q + + LID L K K +EA+ +M D+G T Sbjct: 475 LAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPT 534 Query: 225 VYTYTILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILD 46 V ++ L GL + A K D + GI P TA +++T LC + ++ ACK+ D Sbjct: 535 VASFRALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINT-LCKAQRIKEACKLAD 593 Query: 45 ELAPMG 28 + G Sbjct: 594 GIVDRG 599 Score = 67.8 bits (164), Expect = 9e-10 Identities = 39/126 (30%), Positives = 59/126 (46%) Frame = -1 Query: 384 DEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQTVYTYTIL 205 D L+ +M RG Y+ +I L K K EA A+ + M +GC V YT L Sbjct: 307 DTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTAL 366 Query: 204 IDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILDELAPMGI 25 ID K EEA++ ++ M ++G P ++ VL GLC SG++ ++ D G+ Sbjct: 367 IDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGV 426 Query: 24 IPETAF 7 F Sbjct: 427 AINAMF 432 Score = 62.4 bits (150), Expect = 4e-08 Identities = 33/118 (27%), Positives = 63/118 (53%) Frame = -1 Query: 369 LFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQTVYTYTILIDGLF 190 +F ++ RG N+LI + G V+E L + +RM++ G D ++YTY L++GL Sbjct: 172 VFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 231 Query: 189 KTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILDELAPMGIIPE 16 + E A K +++M I P T ++ ++ G C +GK+ +A + ++ + P+ Sbjct: 232 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPD 289 Score = 61.6 bits (148), Expect = 6e-08 Identities = 35/128 (27%), Positives = 59/128 (46%) Frame = -1 Query: 399 KAGRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQTVY 220 KAG++ +A + F DM + D Y LI A D L+L ME+ G + + Sbjct: 267 KAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPH 326 Query: 219 TYTILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILDEL 40 +Y+++I GL K R+ EA ++ M KG A + L +G + A ++ + + Sbjct: 327 SYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM 386 Query: 39 APMGIIPE 16 G P+ Sbjct: 387 KNEGFEPD 394 >ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560, mitochondrial-like [Cucumis sativus] Length = 651 Score = 219 bits (557), Expect = 2e-55 Identities = 101/135 (74%), Positives = 119/135 (88%) Frame = -1 Query: 405 LGKAGRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQT 226 LGKAGR+++A+ LFE+M +GC +DS+CYNA+IDAL K GK+D+ALAL RME+EGCDQT Sbjct: 438 LGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQT 497 Query: 225 VYTYTILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILD 46 VYT+TILIDGLFK +NEEA+KFWD MIDKGITPT ASFR L+ GLCL GKV RACKILD Sbjct: 498 VYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILD 557 Query: 45 ELAPMGIIPETAFEE 1 +LAPMGIIPETAFE+ Sbjct: 558 DLAPMGIIPETAFED 572 Score = 78.2 bits (191), Expect = 7e-13 Identities = 40/126 (31%), Positives = 73/126 (57%) Frame = -1 Query: 405 LGKAGRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQT 226 L K + EA +FE M +GC + Y ALID+ K+G ++EA+ L +RM++EG + Sbjct: 333 LCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPD 392 Query: 225 VYTYTILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILD 46 TY++L++GL K+ R ++ ++ +D +KG+ + L GL +G++ A + + Sbjct: 393 AVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFE 452 Query: 45 ELAPMG 28 E++ G Sbjct: 453 EMSEKG 458 Score = 72.0 bits (175), Expect = 5e-11 Identities = 43/126 (34%), Positives = 64/126 (50%) Frame = -1 Query: 405 LGKAGRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQT 226 L K G++D+A LF M GC Q + + LID L K K +EA+ +M D+G T Sbjct: 473 LAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPT 532 Query: 225 VYTYTILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILD 46 V ++ L GL + A K D + GI P TA +++T LC + ++ ACK+ D Sbjct: 533 VASFRALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINT-LCKAQRIKEACKLAD 591 Query: 45 ELAPMG 28 + G Sbjct: 592 GIVDRG 597 Score = 67.8 bits (164), Expect = 9e-10 Identities = 39/126 (30%), Positives = 59/126 (46%) Frame = -1 Query: 384 DEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQTVYTYTIL 205 D L+ +M RG Y+ +I L K K EA A+ + M +GC V YT L Sbjct: 305 DTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTAL 364 Query: 204 IDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILDELAPMGI 25 ID K EEA++ ++ M ++G P ++ VL GLC SG++ ++ D G+ Sbjct: 365 IDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGV 424 Query: 24 IPETAF 7 F Sbjct: 425 AINAMF 430 Score = 62.4 bits (150), Expect = 4e-08 Identities = 33/118 (27%), Positives = 63/118 (53%) Frame = -1 Query: 369 LFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQTVYTYTILIDGLF 190 +F ++ RG N+LI + G V+E L + +RM++ G D ++YTY L++GL Sbjct: 170 VFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 229 Query: 189 KTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILDELAPMGIIPE 16 + E A K +++M I P T ++ ++ G C +GK+ +A + ++ + P+ Sbjct: 230 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPD 287 Score = 61.6 bits (148), Expect = 6e-08 Identities = 35/128 (27%), Positives = 59/128 (46%) Frame = -1 Query: 399 KAGRVDEAQKLFEDMITRGCPQDSFCYNALIDALLKSGKVDEALALLQRMEDEGCDQTVY 220 KAG++ +A + F DM + D Y LI A D L+L ME+ G + + Sbjct: 265 KAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPH 324 Query: 219 TYTILIDGLFKTRRNEEALKFWDMMIDKGITPTTASFRVLSTGLCLSGKVVRACKILDEL 40 +Y+++I GL K R+ EA ++ M KG A + L +G + A ++ + + Sbjct: 325 SYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM 384 Query: 39 APMGIIPE 16 G P+ Sbjct: 385 KNEGFEPD 392