BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036340
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36
ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containi...   141   6e-32
ref|XP_004139374.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|NP_563765.1| pentatricopeptide repeat-containing protein [Ar...   135   3e-30
ref|XP_002330712.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29

>ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06270
           [Vitis vinifera] gi|302143379|emb|CBI21940.3| unnamed
           protein product [Vitis vinifera]
          Length = 343

 Score =  155 bits (391), Expect = 4e-36
 Identities = 78/119 (65%), Positives = 93/119 (78%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   IRRTVVVAELMKEMV-KFGLTPRHEMVVKVIAAMRVRKDIWRAVEIIELLQSEGILVGFE 179
           +RRT    ELMKEMV K GLTPR   V+ ++AA+R +K+IW+AVE+IE L+ E    GF 
Sbjct: 219 MRRTTDATELMKEMVAKIGLTPRQGTVLNLVAALRAKKEIWKAVEMIEFLEGEDFNAGFA 278

Query: 180 SYESVLEGCLDCGEYILAGKVVMGMTNRGFIPFIRARLKVVEGLANAGDWELAYAVRQR 356
           SYESVLEGCL C E++LAGKVVMGMT RGFIP+I  R KVVEGLAN G+W+LA AVRQR
Sbjct: 279 SYESVLEGCLACHEFVLAGKVVMGMTARGFIPYIGVRQKVVEGLANLGEWKLALAVRQR 337


>ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06270-like [Glycine max]
          Length = 342

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/119 (57%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   IRRTVVVAELMKEMV-KFGLTPRHEMVVKVIAAMRVRKDIWRAVEIIELLQSEGILVGFE 179
           +R+T    +LMK+MV ++GLTP    +VK++AA+R  ++IW+AVE+IE L+ EG  VGFE
Sbjct: 218 VRKTAKALDLMKQMVVQYGLTPGQGTLVKLLAALRANREIWKAVEMIEFLEKEGNSVGFE 277

Query: 180 SYESVLEGCLDCGEYILAGKVVMGMTNRGFIPFIRARLKVVEGLANAGDWELAYAVRQR 356
           SYE V+EGCL+  EY+LA KV  GMT RGFIP+IR R K++EGLA+  +W LA AVRQR
Sbjct: 278 SYELVIEGCLEKREYVLAAKVATGMTERGFIPYIRVRQKIIEGLASIDEWNLACAVRQR 336


>ref|XP_004139374.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06270-like [Cucumis sativus]
           gi|449483078|ref|XP_004156487.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g06270-like [Cucumis sativus]
          Length = 343

 Score =  136 bits (342), Expect = 2e-30
 Identities = 71/119 (59%), Positives = 90/119 (75%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   IRRTVVVAELMKEMV-KFGLTPRHEMVVKVIAAMRVRKDIWRAVEIIELLQSEGILVGFE 179
           +RRT    EL+KEMV K  L PR   +  V+AA+R  +++ RAVEIIELL+ +   VGFE
Sbjct: 219 VRRTDKAVELLKEMVVKVKLMPRQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFE 278

Query: 180 SYESVLEGCLDCGEYILAGKVVMGMTNRGFIPFIRARLKVVEGLANAGDWELAYAVRQR 356
           SYE ++EGCL+C EYILAGKV MGMT+RGFIP+I+ R +VVEGLA  G+ ELA AVR+R
Sbjct: 279 SYELLVEGCLECREYILAGKVTMGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRR 337


>ref|NP_563765.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75264068|sp|Q9LNC0.1|PPR16_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g06270 gi|8844132|gb|AAF80224.1|AC025290_13 Contains
           similarity to an unknown protein F23N19.4 gi|6630464
           from Arabidopsis thaliana gb|AC007190 and contains
           multiple PPR PF|01535 repeats. EST gb|T44174 comes from
           this gene [Arabidopsis thaliana]
           gi|17529194|gb|AAL38823.1| unknown protein [Arabidopsis
           thaliana] gi|20465473|gb|AAM20196.1| unknown protein
           [Arabidopsis thaliana] gi|21536601|gb|AAM60933.1|
           unknown [Arabidopsis thaliana]
           gi|332189849|gb|AEE27970.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 343

 Score =  135 bits (340), Expect = 3e-30
 Identities = 68/118 (57%), Positives = 90/118 (76%), Gaps = 1/118 (0%)
 Frame = +3

Query: 6   RRTVVVAELMKEMV-KFGLTPRHEMVVKVIAAMRVRKDIWRAVEIIELLQSEGILVGFES 182
           R+T  V +++KEMV K G++PR  M+ KV AA+R  ++IW+A+E+IE ++S    V FES
Sbjct: 220 RKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIEFVESRDYPVEFES 279

Query: 183 YESVLEGCLDCGEYILAGKVVMGMTNRGFIPFIRARLKVVEGLANAGDWELAYAVRQR 356
           YE V+EGCL+  EYILAGKVVM MT+RGFIP+I+ R KVVE L N G+W+LA  VRQR
Sbjct: 280 YEVVVEGCLEVREYILAGKVVMRMTDRGFIPYIKVRQKVVERLINIGEWKLACTVRQR 337


>ref|XP_002330712.1| predicted protein [Populus trichocarpa] gi|222872316|gb|EEF09447.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/119 (55%), Positives = 90/119 (75%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   IRRTVVVAELMKEMV-KFGLTPRHEMVVKVIAAMRVRKDIWRAVEIIELLQSEGILVGFE 179
           +R+     E+MKEMV +  L PR  +VVKV+AA+R  +++ +A E+IE L+ EG  VGFE
Sbjct: 217 VRKCDDAIEMMKEMVVRMRLCPRQGVVVKVLAALRANREMRKAGEMIEFLEKEGYGVGFE 276

Query: 180 SYESVLEGCLDCGEYILAGKVVMGMTNRGFIPFIRARLKVVEGLANAGDWELAYAVRQR 356
           SYE V+EGCL+C ++ LA KVVMGMT +GFIP+I+ R KVVEGL +AG+W+LA  VR+R
Sbjct: 277 SYELVVEGCLECKDFFLAAKVVMGMTEKGFIPYIKVRQKVVEGLIDAGEWKLACTVRER 335