BLASTX nr result

ID: Bupleurum21_contig00036325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036325
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321989.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
emb|CBI23026.3| unnamed protein product [Vitis vinifera]              147   1e-33
ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g...   147   1e-33
ref|XP_002521934.1| nucleic acid binding protein, putative [Rici...   142   3e-32
ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g...   141   6e-32

>ref|XP_002321989.1| predicted protein [Populus trichocarpa] gi|222868985|gb|EEF06116.1|
           predicted protein [Populus trichocarpa]
          Length = 685

 Score =  148 bits (373), Expect = 5e-34
 Identities = 78/135 (57%), Positives = 94/135 (69%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1   LCPVHKINNVVGKSDGIIELLHNEXXXXXXXXXXXXCSDDRIITISSKEDLHDELFPAQE 180
           LCP+ K+N VVG+SDG+++LL NE             SD++IITI S+E   DELFPAQE
Sbjct: 357 LCPIDKVNRVVGESDGLVDLLQNEIGVDVKVADPVSGSDEQIITICSEEGPDDELFPAQE 416

Query: 181 ALLHIQTRIVDLVPDKENFITTSLVVPSDEIGCLQG-SNELSEMMKATGINIQILPTEQH 357
           ALLHIQTRIVDLV DK+N ITT L+VPS EIGCL+G    LSEM   TG  I+ILP E  
Sbjct: 417 ALLHIQTRIVDLVADKDNIITTRLLVPSSEIGCLEGRDGSLSEMESLTGATIEILPKEML 476

Query: 358 PICMSGNHALLQIEG 402
           P  +SG   L+QI+G
Sbjct: 477 PTYLSGTDELVQIQG 491


>emb|CBI23026.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  147 bits (370), Expect = 1e-33
 Identities = 80/135 (59%), Positives = 96/135 (71%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1   LCPVHKINNVVGKSDGIIELLHNEXXXXXXXXXXXXCSDDRIITISSKEDLHDELFPAQE 180
           LCPV K+  VVG+SDGIIELL NE             S+++II I+S+E   DELFPAQE
Sbjct: 257 LCPVDKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQE 316

Query: 181 ALLHIQTRIVDLVPDKENFITTSLVVPSDEIGCLQGSN-ELSEMMKATGINIQILPTEQH 357
           ALLHIQTRIV+L+PDKEN ITT L+VPS EIGC +G +  LSEM + TG NIQI+P EQ 
Sbjct: 317 ALLHIQTRIVNLLPDKENVITTRLLVPSSEIGCFEGRDCSLSEMRRLTGANIQIVPREQL 376

Query: 358 PICMSGNHALLQIEG 402
           P  +SG   LL+I G
Sbjct: 377 PAFISGTDELLEIVG 391


>ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 661

 Score =  147 bits (370), Expect = 1e-33
 Identities = 80/135 (59%), Positives = 96/135 (71%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1   LCPVHKINNVVGKSDGIIELLHNEXXXXXXXXXXXXCSDDRIITISSKEDLHDELFPAQE 180
           LCPV K+  VVG+SDGIIELL NE             S+++II I+S+E   DELFPAQE
Sbjct: 343 LCPVDKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQE 402

Query: 181 ALLHIQTRIVDLVPDKENFITTSLVVPSDEIGCLQGSN-ELSEMMKATGINIQILPTEQH 357
           ALLHIQTRIV+L+PDKEN ITT L+VPS EIGC +G +  LSEM + TG NIQI+P EQ 
Sbjct: 403 ALLHIQTRIVNLLPDKENVITTRLLVPSSEIGCFEGRDCSLSEMRRLTGANIQIVPREQL 462

Query: 358 PICMSGNHALLQIEG 402
           P  +SG   LL+I G
Sbjct: 463 PAFISGTDELLEIVG 477


>ref|XP_002521934.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538859|gb|EEF40458.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 704

 Score =  142 bits (358), Expect = 3e-32
 Identities = 75/135 (55%), Positives = 92/135 (68%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1   LCPVHKINNVVGKSDGIIELLHNEXXXXXXXXXXXXCSDDRIITISSKEDLHDELFPAQE 180
           LCP  K+N VVG+SDGI++LL N+             SD+++I ISS+E   DELFPAQE
Sbjct: 349 LCPADKVNKVVGESDGILDLLQNDIGVDVKVSDPVSGSDEQMIIISSEEGPDDELFPAQE 408

Query: 181 ALLHIQTRIVDLVPDKENFITTSLVVPSDEIGCLQG-SNELSEMMKATGINIQILPTEQH 357
           ALLHIQT I+DLVPD +N I T L+V S EIGCL+G    LSEM + TG  IQILP E+ 
Sbjct: 409 ALLHIQTHIIDLVPDSDNIIKTKLIVSSGEIGCLEGRDGSLSEMERLTGAKIQILPREKL 468

Query: 358 PICMSGNHALLQIEG 402
           P C+S    L+QIEG
Sbjct: 469 PACVSEADELVQIEG 483


>ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus] gi|449517605|ref|XP_004165836.1| PREDICTED: KH
           domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 666

 Score =  141 bits (355), Expect = 6e-32
 Identities = 73/135 (54%), Positives = 95/135 (70%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1   LCPVHKINNVVGKSDGIIELLHNEXXXXXXXXXXXXCSDDRIITISSKEDLHDELFPAQE 180
           LCP+ K+++V+G+S+GIIELL N+             S+++I+ ISS E   DELFPAQE
Sbjct: 339 LCPIEKVDSVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQE 398

Query: 181 ALLHIQTRIVDLVPDKENFITTSLVVPSDEIGCLQG-SNELSEMMKATGINIQILPTEQH 357
           ALLHIQTRIVDLVPDKEN +TT L+VPS +IGCL+G    L EM + TG N+ I+P E  
Sbjct: 399 ALLHIQTRIVDLVPDKENIVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDL 458

Query: 358 PICMSGNHALLQIEG 402
           P+ +SG   L+QI G
Sbjct: 459 PMFVSGADELVQIIG 473


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