BLASTX nr result

ID: Bupleurum21_contig00036322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036322
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307635.1| predicted protein [Populus trichocarpa] gi|2...   415   e-113
ref|XP_002521001.1| Protein mrp, putative [Ricinus communis] gi|...   409   e-112
ref|XP_002300792.1| predicted protein [Populus trichocarpa] gi|2...   398   e-108
ref|XP_003541337.1| PREDICTED: iron-sulfur protein NUBPL-like [G...   391   e-106
ref|XP_003536923.1| PREDICTED: iron-sulfur protein NUBPL-like [G...   390   e-106

>ref|XP_002307635.1| predicted protein [Populus trichocarpa] gi|222857084|gb|EEE94631.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  415 bits (1066), Expect = e-113
 Identities = 194/268 (72%), Positives = 235/268 (87%)
 Frame = +3

Query: 102 LKITGVKDIIAVASGKGGVGKSTTAVNLAVSLANKCRLSVGLLDADVYGPSIPTMMKLQG 281
           L++ GVKD+IAVASGKGGVGKSTTAVNLAV+LA KC+L VGLLDADVYGPS+P MMK+  
Sbjct: 26  LRLEGVKDVIAVASGKGGVGKSTTAVNLAVALAIKCQLKVGLLDADVYGPSVPMMMKIDR 85

Query: 282 KPEVSKANKMLPIENYGVKCISMGCLVEKEAPIVWRGPMVMKALEQLTRGVDWGNLDVLV 461
           KP++++  KM+PIENYGVKC+SMG LVEK+APIVWRGPMVM AL ++TRGVDWGNLD+LV
Sbjct: 86  KPDITEDKKMIPIENYGVKCMSMGFLVEKDAPIVWRGPMVMSALVKMTRGVDWGNLDILV 145

Query: 462 VDMPPGTGDAQISISQRLQLSGALIVSTPQDVALMDARRGVNMFSKVAVPILGIIENMSY 641
           VDMPPGTGDAQ++++Q LQLSGALIVSTPQD+AL+DARRG NMFSKV VPILG +ENMS+
Sbjct: 146 VDMPPGTGDAQLTMTQNLQLSGALIVSTPQDIALLDARRGANMFSKVGVPILGFVENMSF 205

Query: 642 FRCPHCSEPSFIFGKGGARKTAEDMGLRFVGEIPLVEEVRSGSDDGVPIVVSSPESAVAK 821
           F+CPHC EPSFIFGKGGAR  A  MG  F+GEIPL  +VR GSD+G+P+V+S+P+SA++K
Sbjct: 206 FKCPHCGEPSFIFGKGGARNAAASMGHNFLGEIPLEVDVRKGSDEGIPVVISAPDSAISK 265

Query: 822 SYGDLAQNIVRVLEDLAKHQDFQPEISM 905
           +YGD AQN+V  LE+LAK     PEI++
Sbjct: 266 AYGDTAQNVVNKLEELAKEPSLHPEINL 293


>ref|XP_002521001.1| Protein mrp, putative [Ricinus communis]
           gi|223539838|gb|EEF41418.1| Protein mrp, putative
           [Ricinus communis]
          Length = 293

 Score =  409 bits (1051), Expect = e-112
 Identities = 194/274 (70%), Positives = 234/274 (85%)
 Frame = +3

Query: 84  NMNAQSLKITGVKDIIAVASGKGGVGKSTTAVNLAVSLANKCRLSVGLLDADVYGPSIPT 263
           + +   L++ GVKD+IAVASGKGGVGKSTTAVNLAV+LA KC+L VGLLDADVYGPSIPT
Sbjct: 20  SFSRSKLRLEGVKDVIAVASGKGGVGKSTTAVNLAVALATKCQLKVGLLDADVYGPSIPT 79

Query: 264 MMKLQGKPEVSKANKMLPIENYGVKCISMGCLVEKEAPIVWRGPMVMKALEQLTRGVDWG 443
           MM++  KP+V+   KM+PIENYGVKC+S+G LVEK+APIVWRGPMVM ALE++ RGVDWG
Sbjct: 80  MMRIDRKPDVTADTKMIPIENYGVKCMSIGFLVEKDAPIVWRGPMVMSALEKMLRGVDWG 139

Query: 444 NLDVLVVDMPPGTGDAQISISQRLQLSGALIVSTPQDVALMDARRGVNMFSKVAVPILGI 623
           NLD+LVVDMPPGTGDAQ+++SQ LQLSGALIVSTPQDVAL+DARRGV MFSKV VPILG 
Sbjct: 140 NLDILVVDMPPGTGDAQLTVSQNLQLSGALIVSTPQDVALIDARRGVKMFSKVQVPILGF 199

Query: 624 IENMSYFRCPHCSEPSFIFGKGGARKTAEDMGLRFVGEIPLVEEVRSGSDDGVPIVVSSP 803
           IENMS F+CPHC EPS+IFG+GG RKTA  MG  F+GEIPL  E+R  SD+G+PI +S P
Sbjct: 200 IENMSCFKCPHCGEPSYIFGEGGTRKTAASMGYNFIGEIPLEVEIRKSSDEGIPITISLP 259

Query: 804 ESAVAKSYGDLAQNIVRVLEDLAKHQDFQPEISM 905
           +S V+K+Y   A+N+V+ LE+L K + FQPEI++
Sbjct: 260 DSVVSKAYSGAAENVVKRLEELTKEKTFQPEINL 293


>ref|XP_002300792.1| predicted protein [Populus trichocarpa] gi|222842518|gb|EEE80065.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score =  398 bits (1022), Expect = e-108
 Identities = 185/256 (72%), Positives = 224/256 (87%)
 Frame = +3

Query: 102 LKITGVKDIIAVASGKGGVGKSTTAVNLAVSLANKCRLSVGLLDADVYGPSIPTMMKLQG 281
           L++ GVKD+IAVASGKGGVGKSTTAVNLAV+LA  C+L VGLLDADVYGPS+P MMK+  
Sbjct: 5   LRLEGVKDVIAVASGKGGVGKSTTAVNLAVALAKNCQLKVGLLDADVYGPSVPMMMKIDR 64

Query: 282 KPEVSKANKMLPIENYGVKCISMGCLVEKEAPIVWRGPMVMKALEQLTRGVDWGNLDVLV 461
           KP++++  KM+PIENYGVKC+SMG LVEK+APIVWRGPMVM AL ++TRGVDWGNLD+LV
Sbjct: 65  KPDITEDKKMIPIENYGVKCMSMGFLVEKDAPIVWRGPMVMSALAKMTRGVDWGNLDILV 124

Query: 462 VDMPPGTGDAQISISQRLQLSGALIVSTPQDVALMDARRGVNMFSKVAVPILGIIENMSY 641
           VDMPPGTGDAQ++++Q LQLSGALIVSTPQD+ALMDARRG NMFSKV VPILG +ENMS+
Sbjct: 125 VDMPPGTGDAQLTMTQNLQLSGALIVSTPQDIALMDARRGANMFSKVDVPILGFVENMSF 184

Query: 642 FRCPHCSEPSFIFGKGGARKTAEDMGLRFVGEIPLVEEVRSGSDDGVPIVVSSPESAVAK 821
           F+CPHC EPSFIFGK G R  A  MG + +GEIPL  ++R GSD+GVP+V+S+P+S ++K
Sbjct: 185 FKCPHCGEPSFIFGKEGTRNAAASMGYKLIGEIPLEVDIRKGSDEGVPVVISAPDSVISK 244

Query: 822 SYGDLAQNIVRVLEDL 869
           +YGD AQN+V  LE+L
Sbjct: 245 AYGDTAQNVVSKLEEL 260


>ref|XP_003541337.1| PREDICTED: iron-sulfur protein NUBPL-like [Glycine max]
          Length = 277

 Score =  391 bits (1004), Expect = e-106
 Identities = 189/269 (70%), Positives = 228/269 (84%)
 Frame = +3

Query: 93  AQSLKITGVKDIIAVASGKGGVGKSTTAVNLAVSLANKCRLSVGLLDADVYGPSIPTMMK 272
           A+ L+I GVKD IAVASGKGGVGKSTTAVNLAV+LA KC+L VGLLDADVYGPSIPTMM 
Sbjct: 11  AKHLRIDGVKDTIAVASGKGGVGKSTTAVNLAVALARKCQLKVGLLDADVYGPSIPTMMN 70

Query: 273 LQGKPEVSKANKMLPIENYGVKCISMGCLVEKEAPIVWRGPMVMKALEQLTRGVDWGNLD 452
           +  KPEV+   KM+PIENYG+KC+S+G LVEK+APIVWRGPMV  ALE++TRGVDWGNLD
Sbjct: 71  INTKPEVTHDKKMIPIENYGIKCMSIGLLVEKDAPIVWRGPMVSNALEKMTRGVDWGNLD 130

Query: 453 VLVVDMPPGTGDAQISISQRLQLSGALIVSTPQDVALMDARRGVNMFSKVAVPILGIIEN 632
           +LV+DMPPGTGD QI++SQ LQLSGALIVSTPQDVALMDARRGV MF+KV VPILGI+EN
Sbjct: 131 ILVMDMPPGTGDVQIAMSQNLQLSGALIVSTPQDVALMDARRGVKMFNKVDVPILGIVEN 190

Query: 633 MSYFRCPHCSEPSFIFGKGGARKTAEDMGLRFVGEIPLVEEVRSGSDDGVPIVVSSPESA 812
           MS F+CPHC EPS+IFGKGG ++TA +MGL  +G+IPL  E+R   D G PIV+++P+S 
Sbjct: 191 MSCFKCPHCGEPSYIFGKGGTQRTASEMGLELLGKIPLEVEIREACDQGHPIVLAAPDSV 250

Query: 813 VAKSYGDLAQNIVRVLEDLAKHQDFQPEI 899
           V+++YG++A+ + + L    K Q FQPEI
Sbjct: 251 VSRAYGEVAEKLAQKL----KEQQFQPEI 275


>ref|XP_003536923.1| PREDICTED: iron-sulfur protein NUBPL-like [Glycine max]
          Length = 277

 Score =  390 bits (1002), Expect = e-106
 Identities = 189/269 (70%), Positives = 228/269 (84%)
 Frame = +3

Query: 93  AQSLKITGVKDIIAVASGKGGVGKSTTAVNLAVSLANKCRLSVGLLDADVYGPSIPTMMK 272
           A+ L+I GVK+ IAVASGKGGVGKSTTAVNLAV+LA KC+L VGLLDADVYGPSIPTMM 
Sbjct: 11  AKHLRIDGVKNTIAVASGKGGVGKSTTAVNLAVALARKCQLKVGLLDADVYGPSIPTMMN 70

Query: 273 LQGKPEVSKANKMLPIENYGVKCISMGCLVEKEAPIVWRGPMVMKALEQLTRGVDWGNLD 452
           +  KPEV+   KM+P+ENYG+KC+S+G LVEK+APIVWRGPMV  ALE++TRGVDWGNLD
Sbjct: 71  INTKPEVTHDKKMIPVENYGIKCMSIGFLVEKDAPIVWRGPMVSNALEKMTRGVDWGNLD 130

Query: 453 VLVVDMPPGTGDAQISISQRLQLSGALIVSTPQDVALMDARRGVNMFSKVAVPILGIIEN 632
           +LV+DMPPGTGD QI++SQ LQLSGALIVSTPQDVALMDARRGV MF+KV VPILGI+EN
Sbjct: 131 ILVMDMPPGTGDVQIAMSQNLQLSGALIVSTPQDVALMDARRGVKMFNKVDVPILGIVEN 190

Query: 633 MSYFRCPHCSEPSFIFGKGGARKTAEDMGLRFVGEIPLVEEVRSGSDDGVPIVVSSPESA 812
           MS F+CPHC EPS+IFGKGG + TA +MGL F+GEIPL  E+R   D G PIV+++P+S 
Sbjct: 191 MSCFKCPHCGEPSYIFGKGGTQGTASEMGLEFLGEIPLEVEIREACDQGRPIVLAAPDSV 250

Query: 813 VAKSYGDLAQNIVRVLEDLAKHQDFQPEI 899
           V+++YG++A+ + + L    K Q FQPEI
Sbjct: 251 VSRAYGEVAEKLAQKL----KEQKFQPEI 275


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