BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036315
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum...   140   1e-31
emb|CBI21137.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   129   2e-28
ref|XP_004157128.1| PREDICTED: DNA-directed RNA polymerase D sub...   128   6e-28
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...   128   6e-28

>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
          Length = 1123

 Score =  140 bits (352), Expect = 1e-31
 Identities = 62/119 (52%), Positives = 94/119 (78%), Gaps = 4/119 (3%)
 Frame = -2

Query: 350 HQLNSYNEFVRYGLQDVLNSFGEIVVKPGYDISARGDLQWRSATVKFGKVTFEQPKFYAG 171
           HQ+NSYN+F+ YG+Q V +S GEI V+PGYD S RGD  W+ A+VKFGKVT E+PKF+AG
Sbjct: 80  HQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGDWKHASVKFGKVTLERPKFWAG 139

Query: 170 EVFSSDADNAYVEMLPKHARLKNMSYASKMKLQVYLKVYTEKVLRSDR----EDRYIEK 6
           E FS      Y+++LP+HARL+NM+Y++++ ++ +++VYT+K++RSD+     DR+++K
Sbjct: 140 EKFSVGGGKEYLDLLPRHARLQNMTYSARIMVETHVQVYTKKLVRSDKFKTGVDRFVDK 198


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  129 bits (324), Expect = 2e-28
 Identities = 62/120 (51%), Positives = 93/120 (77%), Gaps = 5/120 (4%)
 Frame = -2

Query: 350 HQLNSYNEFVRYGLQDVLNSFGEIVVKPGYDISARGDLQWRSATVKFGKVTFEQPKFYAG 171
           HQ+NS+N+F++ G+Q V +SFGEI V+PGYD S RG+  WR A+V+FGKVT E+P+ +AG
Sbjct: 102 HQINSFNDFIKNGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASVRFGKVTLERPRVWAG 161

Query: 170 EVFSSDADNAYVEMLPKHARLKNMSYASKMKLQVYLKVYTEKVLRSD-----REDRYIEK 6
           E   SD   + +  LP+HARL+NM+Y+S+MK QV+ +VYT+K++RSD     ++++Y+EK
Sbjct: 162 E---SDGKES-LNFLPRHARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEK 217


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
           vinifera]
          Length = 1198

 Score =  129 bits (324), Expect = 2e-28
 Identities = 62/120 (51%), Positives = 93/120 (77%), Gaps = 5/120 (4%)
 Frame = -2

Query: 350 HQLNSYNEFVRYGLQDVLNSFGEIVVKPGYDISARGDLQWRSATVKFGKVTFEQPKFYAG 171
           HQ+NS+N+F++ G+Q V +SFGEI V+PGYD S RG+  WR A+V+FGKVT E+P+ +AG
Sbjct: 66  HQINSFNDFIKNGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASVRFGKVTLERPRVWAG 125

Query: 170 EVFSSDADNAYVEMLPKHARLKNMSYASKMKLQVYLKVYTEKVLRSD-----REDRYIEK 6
           E   SD   + +  LP+HARL+NM+Y+S+MK QV+ +VYT+K++RSD     ++++Y+EK
Sbjct: 126 E---SDGKES-LNFLPRHARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEK 181


>ref|XP_004157128.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
           sativus]
          Length = 1031

 Score =  128 bits (321), Expect = 6e-28
 Identities = 58/119 (48%), Positives = 89/119 (74%), Gaps = 4/119 (3%)
 Frame = -2

Query: 350 HQLNSYNEFVRYGLQDVLNSFGEIVVKPGYDISARGDLQWRSATVKFGKVTFEQPKFYAG 171
           HQ+NSYN+F++ G+Q   + FG+I+V+PGYD S +GD +WR ATVKFGKVT ++PKF+ G
Sbjct: 68  HQINSYNDFIKNGIQKAFDFFGDILVQPGYDPSKKGDGEWRYATVKFGKVTLDKPKFWGG 127

Query: 170 EVFSSDADNAYVEMLPKHARLKNMSYASKMKLQVYLKVYTEKVLRSDR----EDRYIEK 6
                 A      MLP+HARL+NM+Y+S+MK+ + L++YT+K++ SD+    +D+Y++K
Sbjct: 128 A-----ASGKEYNMLPRHARLQNMTYSSRMKINISLEIYTQKLVSSDKFKTGKDQYVDK 181


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
           sativus]
          Length = 1197

 Score =  128 bits (321), Expect = 6e-28
 Identities = 58/119 (48%), Positives = 89/119 (74%), Gaps = 4/119 (3%)
 Frame = -2

Query: 350 HQLNSYNEFVRYGLQDVLNSFGEIVVKPGYDISARGDLQWRSATVKFGKVTFEQPKFYAG 171
           HQ+NSYN+F++ G+Q   + FG+I+V+PGYD S +GD +WR ATVKFGKVT ++PKF+ G
Sbjct: 68  HQINSYNDFIKNGIQKAFDFFGDILVQPGYDPSKKGDGEWRYATVKFGKVTLDKPKFWGG 127

Query: 170 EVFSSDADNAYVEMLPKHARLKNMSYASKMKLQVYLKVYTEKVLRSDR----EDRYIEK 6
                 A      MLP+HARL+NM+Y+S+MK+ + L++YT+K++ SD+    +D+Y++K
Sbjct: 128 A-----ASGKEYNMLPRHARLQNMTYSSRMKINISLEIYTQKLVSSDKFKTGKDQYVDK 181