BLASTX nr result

ID: Bupleurum21_contig00036307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036307
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL15647.1|AF411550_1 hypothetical protein [Medicago sativa]        77   7e-14
ref|XP_004148597.1| PREDICTED: BRCA1-A complex subunit Abraxas-l...    77   9e-14
ref|XP_003604537.1| hypothetical protein MTR_4g014250 [Medicago ...    77   1e-13
emb|CBI18106.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_002263634.1| PREDICTED: BRCA1-A complex subunit Abraxas [...    75   7e-12

>gb|AAL15647.1|AF411550_1 hypothetical protein [Medicago sativa]
          Length = 360

 Score = 76.6 bits (187), Expect(2) = 7e-14
 Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
 Frame = -2

Query: 547 RVYQFQLSAEDFEPKTIKIVNIGPCV-GNKADYQTNSLFPEMPYEIRDSNSMSEDDKDMS 371
           RVYQFQ+ ++ F P +I+I+NIGP   G+   +  NS FP +  ++  S + S+DD +  
Sbjct: 223 RVYQFQIESQSFNPVSIEIINIGPAFRGHYGSFIPNSPFPVLDCQLSYSPTDSDDDYEKL 282

Query: 370 FSWKN-----QSQLDLCSDGFLVRRSENLTGPVASGYTSQVEDLYSKMI 239
              K      +   D+C++G+ V+R  NL G  A  YT  +EDLY KM+
Sbjct: 283 SKMKQNFYGIKGSWDVCAEGYEVKRLSNLMGSEAKNYTQSLEDLYLKML 331



 Score = 25.4 bits (54), Expect(2) = 7e-14
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -3

Query: 240 LAKLVEQSSARVLDQGECLS 181
           L  LVEQSSA+VL+Q + +S
Sbjct: 337 LTTLVEQSSAKVLEQHQLVS 356


>ref|XP_004148597.1| PREDICTED: BRCA1-A complex subunit Abraxas-like [Cucumis sativus]
           gi|449530041|ref|XP_004172005.1| PREDICTED: BRCA1-A
           complex subunit Abraxas-like [Cucumis sativus]
          Length = 322

 Score = 76.6 bits (187), Expect(2) = 9e-14
 Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
 Frame = -2

Query: 547 RVYQFQLSAEDFEPKTIKIVNIGPCV-GNKADYQTNSLFPEMPYEIRDSNSMSEDDKD-- 377
           R +QF+ S E FEPK+I IVNIGP   G+   +  NS FP +  E+R S  M+ED  D  
Sbjct: 177 RAFQFRSSNEFFEPKSIDIVNIGPAFRGHYGSFIPNSPFPHLLCEMRAS-PMNEDKNDDN 235

Query: 376 ---MSFSWKNQSQLDLCSDGFLVRRSENLTGPVASGYTSQVEDLYSKMI 239
              M  + K Q Q+++C++GF V     L G  A+ YT+ +EDLY KM+
Sbjct: 236 LNMMKQNSKYQKQMNVCAEGFDVGNLTRLLGSEAANYTAGLEDLYEKML 284



 Score = 25.0 bits (53), Expect(2) = 9e-14
 Identities = 11/15 (73%), Positives = 15/15 (100%)
 Frame = -3

Query: 240 LAKLVEQSSARVLDQ 196
           LA+LVE+SSA+VL+Q
Sbjct: 290 LARLVEESSAQVLEQ 304


>ref|XP_003604537.1| hypothetical protein MTR_4g014250 [Medicago truncatula]
           gi|355505592|gb|AES86734.1| hypothetical protein
           MTR_4g014250 [Medicago truncatula]
          Length = 274

 Score = 77.4 bits (189), Expect(2) = 1e-13
 Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 5/108 (4%)
 Frame = -2

Query: 547 RVYQFQLSAEDFEPKTIKIVNIGPCV-GNKADYQTNSLFPEMPYEIRDSNSMSEDDKD-- 377
           RVYQF   ++ F P +I+I+NIGP   G+   +  NS FP +  ++     + +DD +  
Sbjct: 129 RVYQFLSESQSFNPVSIEIINIGPAFWGHYGSFIPNSPFPVLDCQLSYLPMIQDDDNEKL 188

Query: 376 --MSFSWKNQSQLDLCSDGFLVRRSENLTGPVASGYTSQVEDLYSKMI 239
             M  + K+Q +LD+C++G+ V+R  NL G  A  YT  +EDLY KM+
Sbjct: 189 SKMKQTSKDQRELDVCAEGYEVKRLSNLMGSEAKNYTQSLEDLYLKML 236



 Score = 23.9 bits (50), Expect(2) = 1e-13
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = -3

Query: 240 LAKLVEQSSARVLDQ 196
           L  LVEQSSA+VL+Q
Sbjct: 242 LTTLVEQSSAKVLEQ 256


>emb|CBI18106.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 43/106 (40%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
 Frame = -2

Query: 547 RVYQFQLSAEDFEPKTIKIVNIGPCV-GNKADYQTNSLFPEMPYEIRDSNSMSEDDKDMS 371
           + YQ+ LS++  EPK+I IVNIGP   G+   +  +S FP +  ++R S  M+EDD D +
Sbjct: 485 KAYQYCLSSQTLEPKSIDIVNIGPAFRGHYGSFSPSSPFPSLACDLRGS-PMAEDDTDAT 543

Query: 370 FSWKNQSQ--LDLCSDGFLVRRSENLTGPVASGYTSQVEDLYSKMI 239
              K Q+Q  LD C++G  +     L G  A+ YT+ +EDLY KM+
Sbjct: 544 RVSKAQAQRELDTCAEGVQIGSLRRLMGSEATNYTAGLEDLYEKML 589


>ref|XP_002263634.1| PREDICTED: BRCA1-A complex subunit Abraxas [Vitis vinifera]
          Length = 306

 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 43/106 (40%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
 Frame = -2

Query: 547 RVYQFQLSAEDFEPKTIKIVNIGPCV-GNKADYQTNSLFPEMPYEIRDSNSMSEDDKDMS 371
           + YQ+ LS++  EPK+I IVNIGP   G+   +  +S FP +  ++R S  M+EDD D +
Sbjct: 167 KAYQYCLSSQTLEPKSIDIVNIGPAFRGHYGSFSPSSPFPSLACDLRGS-PMAEDDTDAT 225

Query: 370 FSWKNQSQ--LDLCSDGFLVRRSENLTGPVASGYTSQVEDLYSKMI 239
              K Q+Q  LD C++G  +     L G  A+ YT+ +EDLY KM+
Sbjct: 226 RVSKAQAQRELDTCAEGVQIGSLRRLMGSEATNYTAGLEDLYEKML 271


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