BLASTX nr result
ID: Bupleurum21_contig00036245
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00036245 (519 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002305818.1| predicted protein [Populus trichocarpa] gi|2... 74 3e-12 ref|XP_002334655.1| predicted protein [Populus trichocarpa] gi|2... 73 2e-11 emb|CAN65857.1| hypothetical protein VITISV_014846 [Vitis vinifera] 66 1e-10 ref|XP_002875493.1| hypothetical protein ARALYDRAFT_347288 [Arab... 64 3e-10 ref|XP_002532630.1| transcription factor, putative [Ricinus comm... 59 4e-09 >ref|XP_002305818.1| predicted protein [Populus trichocarpa] gi|222848782|gb|EEE86329.1| predicted protein [Populus trichocarpa] Length = 188 Score = 73.9 bits (180), Expect(2) = 3e-12 Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 4/131 (3%) Frame = -2 Query: 443 EQEDARSAEEDGR-RVANRLRSFR-NYAPGEEAVMTLHGVSTRLKLYQ--DPWTIKKLLQ 276 + + SAEE R RVA LR R +Y G+ + GVST L LY DP+TIKK ++ Sbjct: 16 QPRNKESAEELERSRVAFNLRRMRTSYTLGDLLEESSRGVSTHLSLYHHYDPFTIKKKMK 75 Query: 275 QSDVNKLCRLMIPKRLVHQHVIPEWRRCGKQQDVNDLENNRELQVRVWDCDRSQEYVLTL 96 SD+ LCRL++P LV ++++P + + + VN E N L+V VWD + + L Sbjct: 76 PSDLGNLCRLLVPSDLVEKYILP-FLNTDQIKQVNQ-ETNLGLKVSVWDMNTQSMHQLVF 133 Query: 95 RKHESSDCYVF 63 ++ +S Y+F Sbjct: 134 KRWSTSRSYIF 144 Score = 22.3 bits (46), Expect(2) = 3e-12 Identities = 8/21 (38%), Positives = 12/21 (57%) Frame = -3 Query: 64 FVKNWSRQFIVERGLKKGDNI 2 F W++ F+ R L +GD I Sbjct: 144 FNDGWTKDFVRRRNLVEGDEI 164 >ref|XP_002334655.1| predicted protein [Populus trichocarpa] gi|222874067|gb|EEF11198.1| predicted protein [Populus trichocarpa] Length = 269 Score = 73.2 bits (178), Expect = 2e-11 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 2/129 (1%) Frame = -2 Query: 443 EQEDARSAEEDGRRVANRLRSFRN-YAPGEEAVMTLHGVSTRLKLYQ-DPWTIKKLLQQS 270 + + S EE RRVA LR+ R+ ++ G+ GVST+L LY DP+ IKK ++ S Sbjct: 94 DSRNNESGEELERRVAFNLRTMRSSFSLGDLLEERSRGVSTQLSLYHHDPFEIKKKMKPS 153 Query: 269 DVNKLCRLMIPKRLVHQHVIPEWRRCGKQQDVNDLENNRELQVRVWDCDRSQEYVLTLRK 90 D+ LCRL++ LV +H++P +Q + + L+V VWD D + L ++ Sbjct: 154 DLGNLCRLLVSADLVEKHILPFLNEDQTKQVIIPNQEINGLKVWVWDIDTGSMHQLVFKR 213 Query: 89 HESSDCYVF 63 +S Y+F Sbjct: 214 WSTSKSYIF 222 >emb|CAN65857.1| hypothetical protein VITISV_014846 [Vitis vinifera] Length = 209 Score = 65.9 bits (159), Expect(2) = 1e-10 Identities = 40/127 (31%), Positives = 72/127 (56%), Gaps = 1/127 (0%) Frame = -2 Query: 443 EQEDARSAEEDGRRVANRLRSFRNYAPGEEAVMTLHGVSTRLKLYQDPWTIKKLLQQSDV 264 E + + S++++ R A+++ + + Y EE ++TRL+L++D WTIKK+LQ+SDV Sbjct: 47 EGDGSISSDDEHRNQASKIAAMKVYTEEEEEEEKK--LTTRLRLHEDTWTIKKVLQESDV 104 Query: 263 NKLCRLMIPKRLVHQHVIPEWRRCGKQQDVNDLENNRELQVRVWDCDRS-QEYVLTLRKH 87 N RL++ +V +H+I + Q V + + ++ V D D EY LTL++ Sbjct: 105 NGSSRLLLSTHVVEEHIIKKM----DQNHVEKIYSGEGARITVCDYDTDMSEYQLTLKRW 160 Query: 86 ESSDCYV 66 S+ +V Sbjct: 161 PSTRSFV 167 Score = 24.6 bits (52), Expect(2) = 1e-10 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = -3 Query: 61 VKNWSRQFIVERGLKKGDNI 2 + NW R F RGLK D I Sbjct: 169 INNWRRDFEKRRGLKCNDEI 188 >ref|XP_002875493.1| hypothetical protein ARALYDRAFT_347288 [Arabidopsis lyrata subsp. lyrata] gi|297321331|gb|EFH51752.1| hypothetical protein ARALYDRAFT_347288 [Arabidopsis lyrata subsp. lyrata] Length = 224 Score = 64.3 bits (155), Expect(2) = 3e-10 Identities = 36/121 (29%), Positives = 63/121 (52%) Frame = -2 Query: 428 RSAEEDGRRVANRLRSFRNYAPGEEAVMTLHGVSTRLKLYQDPWTIKKLLQQSDVNKLCR 249 R ++E +++ RN + E+A +GVST L L++DPW IKK L SD+ +L R Sbjct: 56 RPSDEKSTNEERKIKRMRNLSNEEKAEEEWYGVSTELTLFKDPWIIKKELTNSDLGQLSR 115 Query: 248 LMIPKRLVHQHVIPEWRRCGKQQDVNDLENNRELQVRVWDCDRSQEYVLTLRKHESSDCY 69 L++ + H+I + D N+++ + V V+D D + L L++ + + Y Sbjct: 116 LLLHTGPIEDHII----KYLNNDDKNNVQQGLGITVDVYDHDTDSTFELILKRWTTLNSY 171 Query: 68 V 66 V Sbjct: 172 V 172 Score = 25.0 bits (53), Expect(2) = 3e-10 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = -3 Query: 52 WSRQFIVERGLKKGDNI 2 W FI RGL+KGD I Sbjct: 177 WRMYFIRRRGLRKGDQI 193 >ref|XP_002532630.1| transcription factor, putative [Ricinus communis] gi|223527650|gb|EEF29761.1| transcription factor, putative [Ricinus communis] Length = 251 Score = 58.9 bits (141), Expect(2) = 4e-09 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 8/98 (8%) Frame = -2 Query: 332 VSTRLKLYQDPWT--------IKKLLQQSDVNKLCRLMIPKRLVHQHVIPEWRRCGKQQD 177 VST L LY DP IKK+L++SD+ LCRL+I L+ H++P Sbjct: 118 VSTELTLYGDPCKKIRKYPGIIKKILKESDLGSLCRLLISTALIKNHILPFL----SNDV 173 Query: 176 VNDLENNRELQVRVWDCDRSQEYVLTLRKHESSDCYVF 63 ++ +N V +WD D + E+ LTL+K S +VF Sbjct: 174 AEEVNSNHGATVILWDIDTATEHKLTLKKWISCGSFVF 211 Score = 26.6 bits (57), Expect(2) = 4e-09 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -3 Query: 64 FVKNWSRQFIVERGLKKGDNI 2 F W++ F+ R LKKGD I Sbjct: 211 FNDGWTQNFVKRRNLKKGDEI 231