BLASTX nr result

ID: Bupleurum21_contig00036245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036245
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305818.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-12
ref|XP_002334655.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
emb|CAN65857.1| hypothetical protein VITISV_014846 [Vitis vinifera]    66   1e-10
ref|XP_002875493.1| hypothetical protein ARALYDRAFT_347288 [Arab...    64   3e-10
ref|XP_002532630.1| transcription factor, putative [Ricinus comm...    59   4e-09

>ref|XP_002305818.1| predicted protein [Populus trichocarpa] gi|222848782|gb|EEE86329.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score = 73.9 bits (180), Expect(2) = 3e-12
 Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 4/131 (3%)
 Frame = -2

Query: 443 EQEDARSAEEDGR-RVANRLRSFR-NYAPGEEAVMTLHGVSTRLKLYQ--DPWTIKKLLQ 276
           +  +  SAEE  R RVA  LR  R +Y  G+    +  GVST L LY   DP+TIKK ++
Sbjct: 16  QPRNKESAEELERSRVAFNLRRMRTSYTLGDLLEESSRGVSTHLSLYHHYDPFTIKKKMK 75

Query: 275 QSDVNKLCRLMIPKRLVHQHVIPEWRRCGKQQDVNDLENNRELQVRVWDCDRSQEYVLTL 96
            SD+  LCRL++P  LV ++++P +    + + VN  E N  L+V VWD +    + L  
Sbjct: 76  PSDLGNLCRLLVPSDLVEKYILP-FLNTDQIKQVNQ-ETNLGLKVSVWDMNTQSMHQLVF 133

Query: 95  RKHESSDCYVF 63
           ++  +S  Y+F
Sbjct: 134 KRWSTSRSYIF 144



 Score = 22.3 bits (46), Expect(2) = 3e-12
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 64  FVKNWSRQFIVERGLKKGDNI 2
           F   W++ F+  R L +GD I
Sbjct: 144 FNDGWTKDFVRRRNLVEGDEI 164


>ref|XP_002334655.1| predicted protein [Populus trichocarpa] gi|222874067|gb|EEF11198.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
 Frame = -2

Query: 443 EQEDARSAEEDGRRVANRLRSFRN-YAPGEEAVMTLHGVSTRLKLYQ-DPWTIKKLLQQS 270
           +  +  S EE  RRVA  LR+ R+ ++ G+       GVST+L LY  DP+ IKK ++ S
Sbjct: 94  DSRNNESGEELERRVAFNLRTMRSSFSLGDLLEERSRGVSTQLSLYHHDPFEIKKKMKPS 153

Query: 269 DVNKLCRLMIPKRLVHQHVIPEWRRCGKQQDVNDLENNRELQVRVWDCDRSQEYVLTLRK 90
           D+  LCRL++   LV +H++P       +Q +   +    L+V VWD D    + L  ++
Sbjct: 154 DLGNLCRLLVSADLVEKHILPFLNEDQTKQVIIPNQEINGLKVWVWDIDTGSMHQLVFKR 213

Query: 89  HESSDCYVF 63
             +S  Y+F
Sbjct: 214 WSTSKSYIF 222


>emb|CAN65857.1| hypothetical protein VITISV_014846 [Vitis vinifera]
          Length = 209

 Score = 65.9 bits (159), Expect(2) = 1e-10
 Identities = 40/127 (31%), Positives = 72/127 (56%), Gaps = 1/127 (0%)
 Frame = -2

Query: 443 EQEDARSAEEDGRRVANRLRSFRNYAPGEEAVMTLHGVSTRLKLYQDPWTIKKLLQQSDV 264
           E + + S++++ R  A+++ + + Y   EE       ++TRL+L++D WTIKK+LQ+SDV
Sbjct: 47  EGDGSISSDDEHRNQASKIAAMKVYTEEEEEEEKK--LTTRLRLHEDTWTIKKVLQESDV 104

Query: 263 NKLCRLMIPKRLVHQHVIPEWRRCGKQQDVNDLENNRELQVRVWDCDRS-QEYVLTLRKH 87
           N   RL++   +V +H+I +      Q  V  + +    ++ V D D    EY LTL++ 
Sbjct: 105 NGSSRLLLSTHVVEEHIIKKM----DQNHVEKIYSGEGARITVCDYDTDMSEYQLTLKRW 160

Query: 86  ESSDCYV 66
            S+  +V
Sbjct: 161 PSTRSFV 167



 Score = 24.6 bits (52), Expect(2) = 1e-10
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 61  VKNWSRQFIVERGLKKGDNI 2
           + NW R F   RGLK  D I
Sbjct: 169 INNWRRDFEKRRGLKCNDEI 188


>ref|XP_002875493.1| hypothetical protein ARALYDRAFT_347288 [Arabidopsis lyrata subsp.
           lyrata] gi|297321331|gb|EFH51752.1| hypothetical protein
           ARALYDRAFT_347288 [Arabidopsis lyrata subsp. lyrata]
          Length = 224

 Score = 64.3 bits (155), Expect(2) = 3e-10
 Identities = 36/121 (29%), Positives = 63/121 (52%)
 Frame = -2

Query: 428 RSAEEDGRRVANRLRSFRNYAPGEEAVMTLHGVSTRLKLYQDPWTIKKLLQQSDVNKLCR 249
           R ++E       +++  RN +  E+A    +GVST L L++DPW IKK L  SD+ +L R
Sbjct: 56  RPSDEKSTNEERKIKRMRNLSNEEKAEEEWYGVSTELTLFKDPWIIKKELTNSDLGQLSR 115

Query: 248 LMIPKRLVHQHVIPEWRRCGKQQDVNDLENNRELQVRVWDCDRSQEYVLTLRKHESSDCY 69
           L++    +  H+I    +     D N+++    + V V+D D    + L L++  + + Y
Sbjct: 116 LLLHTGPIEDHII----KYLNNDDKNNVQQGLGITVDVYDHDTDSTFELILKRWTTLNSY 171

Query: 68  V 66
           V
Sbjct: 172 V 172



 Score = 25.0 bits (53), Expect(2) = 3e-10
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 52  WSRQFIVERGLKKGDNI 2
           W   FI  RGL+KGD I
Sbjct: 177 WRMYFIRRRGLRKGDQI 193


>ref|XP_002532630.1| transcription factor, putative [Ricinus communis]
           gi|223527650|gb|EEF29761.1| transcription factor,
           putative [Ricinus communis]
          Length = 251

 Score = 58.9 bits (141), Expect(2) = 4e-09
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
 Frame = -2

Query: 332 VSTRLKLYQDPWT--------IKKLLQQSDVNKLCRLMIPKRLVHQHVIPEWRRCGKQQD 177
           VST L LY DP          IKK+L++SD+  LCRL+I   L+  H++P          
Sbjct: 118 VSTELTLYGDPCKKIRKYPGIIKKILKESDLGSLCRLLISTALIKNHILPFL----SNDV 173

Query: 176 VNDLENNRELQVRVWDCDRSQEYVLTLRKHESSDCYVF 63
             ++ +N    V +WD D + E+ LTL+K  S   +VF
Sbjct: 174 AEEVNSNHGATVILWDIDTATEHKLTLKKWISCGSFVF 211



 Score = 26.6 bits (57), Expect(2) = 4e-09
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 64  FVKNWSRQFIVERGLKKGDNI 2
           F   W++ F+  R LKKGD I
Sbjct: 211 FNDGWTQNFVKRRNLKKGDEI 231


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