BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036236
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE56566.1| hypothetical protein OsJ_05904 [Oryza sativa Japo...    77   2e-12
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    76   3e-12
gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japo...    74   9e-12
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...    72   5e-11
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    70   2e-10

>gb|EEE56566.1| hypothetical protein OsJ_05904 [Oryza sativa Japonica Group]
          Length = 420

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/119 (38%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
 Frame = +2

Query: 2   ILKARYFPESHILNAEKGRGSSFLWLGIWQAKELLKGGFRWIVGDGNSIVATKDQWLTN- 178
           +LK RYFP     +A + R +SF W  I   KELLK G  W VGDG SI    D W+ N 
Sbjct: 32  VLKGRYFPNCSFWDAPQPRSASFTWRSILFGKELLKKGVAWRVGDGKSIKILSDNWIPNV 91

Query: 179 KRGFAVENSHIYEGRNETVASLFYQGSKLWNVGRVQELFTADDASAILATRVPQHVTSD 355
           + G      HI E  + TV  L  +G K WN   V+  F  + A+ IL   + +H   D
Sbjct: 92  QAGLVSPLMHIPE--DATVQFLMEEGGKEWNHDLVKYAFDEETANEILQVPISRHGGDD 148


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
 Frame = +2

Query: 2    ILKARYFPESHILNAEKGRGSSFLWLGIWQAKELLKGGFRWIVGDGNSIVATKDQWLTNK 181
            + KA+YF +   L+++ G   S++W  IW AK ++  G++W +G G  I     +WL + 
Sbjct: 1286 LFKAKYFNKCDFLDSKIGHNPSYVWRNIWGAKRVVSEGYKWSIGSGTDICVWDQRWLVDG 1345

Query: 182  RGFAVENSHIYEGRNETVASLFYQGSKLWNVGRVQELFTADDASAILATRV--PQHVT 349
                   S   E +  TVA LF   ++ WNVG ++ L + +D + IL T +  P H++
Sbjct: 1346 GVLQKPESLPEEFKELTVADLFISQTRFWNVGLLRNLVSNEDTNRILNTPIFEPNHLS 1403


>gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japonica Group]
          Length = 1049

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/118 (36%), Positives = 61/118 (51%)
 Frame = +2

Query: 2   ILKARYFPESHILNAEKGRGSSFLWLGIWQAKELLKGGFRWIVGDGNSIVATKDQWLTNK 181
           +LK RYFP+S   +A K R +SF W  I   +ELLK G RW VGDG++I  TKD+W+   
Sbjct: 607 VLKGRYFPDSDFWSAPKPRSASFTWRSILFGRELLKKGVRWAVGDGSTIKITKDKWIPGV 666

Query: 182 RGFAVENSHIYEGRNETVASLFYQGSKLWNVGRVQELFTADDASAILATRVPQHVTSD 355
           +   V N+      + TV  L       W+   V+ +F  D A  +L   + +H   D
Sbjct: 667 QAGMV-NTRFPIPDDVTVDWLMNPERNAWDEEIVKAVFNDDIAREVLQVPISRHGGED 723


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/109 (35%), Positives = 52/109 (47%)
 Frame = +2

Query: 2   ILKARYFPESHILNAEKGRGSSFLWLGIWQAKELLKGGFRWIVGDGNSIVATKDQWLTNK 181
           ILKA+YFP    L+A  G   S+ W  +W  + LL  G RW +GDG+ I      W+ N 
Sbjct: 416 ILKAKYFPRRDFLDATLGHNPSYTWRSLWSTQSLLTLGHRWKIGDGSKINVWSMPWIRNL 475

Query: 182 RGFAVENSHIYEGRNETVASLFYQGSKLWNVGRVQELFTADDASAILAT 328
                  S      + TV SL       W+   VQ LF   +A+AIL+T
Sbjct: 476 LSLKPSTSPPLHQHDLTVNSLLSADFNSWDTTLVQSLFNDAEAAAILST 524


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/118 (29%), Positives = 54/118 (45%)
 Frame = +2

Query: 2    ILKARYFPESHILNAEKGRGSSFLWLGIWQAKELLKGGFRWIVGDGNSIVATKDQWLTNK 181
            +L+ARYF  S +L A +G   SF W  IW +K LL  G +W VG G  I   +D W+  +
Sbjct: 887  LLQARYFKSSELLEARRGYNPSFTWRSIWGSKSLLLEGLKWCVGSGERIRVWEDAWILGE 946

Query: 182  RGFAVENSHIYEGRNETVASLFYQGSKLWNVGRVQELFTADDASAILATRVPQHVTSD 355
                V         +  V  L       WN+  VQ+ F  ++   +L+  + + +  D
Sbjct: 947  GAHMVPTPQADSNLDLKVCDLIDVARGAWNIESVQQTFVEEEWELVLSIPLSRFLPDD 1004