BLASTX nr result

ID: Bupleurum21_contig00036230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036230
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61992.1| hypothetical protein VITISV_030445 [Vitis vinifera]    65   9e-09
ref|XP_002281118.2| PREDICTED: transcription factor bHLH110-like...    64   1e-08

>emb|CAN61992.1| hypothetical protein VITISV_030445 [Vitis vinifera]
          Length = 512

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 68/193 (35%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
 Frame = -1

Query: 546 NSTLNNGKFNRNVNG-------------------TSMSTQDMGF------GSFTTLSAHD 442
           N  LN G FN N NG                    S   QD+GF      GSFT+ SAHD
Sbjct: 67  NIILNTGSFNPNFNGILFNPRDSRQKNDSILHPLNSSVVQDLGFHWASNAGSFTSQSAHD 126

Query: 441 QLQLSRIKDELSASTSSDHHSNFPRFT-MLNTXXXXXSIEDSHLLHPSVDVDYVKNEQRN 265
                 IK+ELS S        FP+FT M+N+      +ED HL   S    Y++++  N
Sbjct: 127 LHPX--IKEELSES--------FPKFTEMINSSSSA--VEDLHLPPTS----YIRSKDLN 170

Query: 264 ------VLRTFSSDCQFNGSFQLQXXXXXGFYSNPQQKYDYPMXXXXXXXXXXXXARGTF 103
                 +L++FSS CQ NG  QL       F +N Q                   +RG F
Sbjct: 171 DLSEKLLLKSFSSGCQING-LQLSAGE---FXANAQS-------CNTGFGGVAIPSRGHF 219

Query: 102 SQILPTINISNLN 64
           SQI PTINISNL+
Sbjct: 220 SQIFPTINISNLS 232


>ref|XP_002281118.2| PREDICTED: transcription factor bHLH110-like [Vitis vinifera]
           gi|302142540|emb|CBI19743.3| unnamed protein product
           [Vitis vinifera]
          Length = 427

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 68/193 (35%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
 Frame = -1

Query: 546 NSTLNNGKFNRNVNG-------------------TSMSTQDMGF------GSFTTLSAHD 442
           N  LN G FN N NG                    S   QD+GF      GSFT+ SAHD
Sbjct: 42  NIILNTGSFNPNFNGILFNPRDSRQKNDSILHPLNSSVVQDLGFHWASNAGSFTSQSAHD 101

Query: 441 QLQLSRIKDELSASTSSDHHSNFPRFT-MLNTXXXXXSIEDSHLLHPSVDVDYVKNEQRN 265
                 IK+ELS S        FP+FT M+N+      +ED HL   S    Y++++  N
Sbjct: 102 LHPT--IKEELSES--------FPKFTEMINSSSSA--VEDLHLPPTS----YIRSKDLN 145

Query: 264 ------VLRTFSSDCQFNGSFQLQXXXXXGFYSNPQQKYDYPMXXXXXXXXXXXXARGTF 103
                 +L++FSS CQ NG  QL       F +N Q                   +RG F
Sbjct: 146 DLSEKLLLKSFSSGCQING-LQLSAGE---FCANAQS-------CNTGFGGVAIPSRGHF 194

Query: 102 SQILPTINISNLN 64
           SQI PTINISNL+
Sbjct: 195 SQIFPTINISNLS 207


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