BLASTX nr result
ID: Bupleurum21_contig00036218
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00036218
(1029 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 422 e-116
emb|CBI32027.3| unnamed protein product [Vitis vinifera] 421 e-115
ref|XP_002321756.1| predicted protein [Populus trichocarpa] gi|2... 391 e-106
ref|NP_174026.1| regulator of chromosome condensation-like prote... 384 e-104
ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medi... 381 e-103
>ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
Length = 400
Score = 422 bits (1084), Expect = e-116
Identities = 209/345 (60%), Positives = 248/345 (71%), Gaps = 8/345 (2%)
Frame = -2
Query: 1013 IWSWGAGTDGQLATGRLQDEHLPQLL--PSFLFPHPISSFSCGGAHVIALLHGGKVLTWG 840
IWSWGAGTDGQL T RL+DEHLPQLL P F PIS +CGGAHV+AL GKV+TWG
Sbjct: 14 IWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTWG 73
Query: 839 RGTSGQLGHGDSLNCSTPMPVEFFQDIVITNASAGWNHSGFVSDKGCLFTCGDGSFGQLG 660
RGTSGQLGHGD ++ P V+ + V+T+ SAGW+HSGFVSD GCLFTCGDGSFGQLG
Sbjct: 74 RGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQLG 133
Query: 659 HGDSKSQLTPTLVSSFVCRRVNKIACGLRHSLALLEGHSGDQVYGFGSARRGQLGIPHDS 480
HGD KS +P VS F + V++IACG+RHSL LL+ GDQVYGFGS +RGQLG+ D+
Sbjct: 134 HGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLK---GDQVYGFGSGKRGQLGVSMDN 190
Query: 479 LRYVSTPQSIHGLGDNNVVCISANGDHSAALSTDGHMYIWGRGFAGDSDVCYPQCATSSS 300
R +S PQ+ GL ++ I ANGDHSAALS +GH+Y WGRGF SDV P+C SS
Sbjct: 191 TRSISVPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRGFGSTSDVHCPRCLPSSL 250
Query: 299 SVSQVAIGWHHALVLTSDGKVFMFGGSRHGVLSDPLKTSMLTKSS------RSAEESNNL 138
+QVA+GW+H LVLT G+VFM GG+RHGVL DP K S + S EES
Sbjct: 251 CFTQVALGWNHMLVLTGGGEVFMLGGNRHGVLGDPQKGSQVKHLSVIEVFLHGPEESREE 310
Query: 137 VMERVPDCDGMKVIQVAAGAEHSALVREDYAIMTWGWGEHGQLGL 3
+E+V DG+ V+Q+AAGAEHSALV E+ I TWGWGEHGQLGL
Sbjct: 311 NLEKVQGLDGLNVVQIAAGAEHSALVTENRVIKTWGWGEHGQLGL 355
Score = 76.3 bits (186), Expect = 1e-11
Identities = 76/294 (25%), Positives = 117/294 (39%), Gaps = 69/294 (23%)
Frame = -2
Query: 1016 RIWSWGAGTDGQLATG----RLQDEHLPQLLPSFLFPHPISSFSCGGAHVIALLHGGKVL 849
++ +WG GT GQL G LQ +H+ +LL SF+ H S G +H + G +
Sbjct: 68 KVVTWGRGTSGQLGHGDMVSSLQPKHV-KLLESFVMTH----VSAGWSHSGFVSDTGCLF 122
Query: 848 TWGRGTSGQLGHGDSLNCSTPMPVEFFQDIVITNASAGWNHSGFVSDKGCLFTCGDGSFG 669
T G G+ GQLGHGD + +P+ V +F + + G HS + ++ G G G
Sbjct: 123 TCGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGDQVYGFGSGKRG 182
Query: 668 QLG----------------------------HGDSKSQLT-------------------- 633
QLG +GD + L+
Sbjct: 183 QLGVSMDNTRSISVPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRGFGSTSDVHC 242
Query: 632 PTLVSSFVCRRVNKIACGLRHSLALLEGHSGDQVYGFGSARRGQLGIPH--DSLRYVS-- 465
P + S +C ++A G H L L G +V+ G R G LG P ++++S
Sbjct: 243 PRCLPSSLC--FTQVALGWNHMLVLT---GGGEVFMLGGNRHGVLGDPQKGSQVKHLSVI 297
Query: 464 -------------TPQSIHGLGDNNVVCISANGDHSAALSTDGHMYIWGRGFAG 342
+ + GL NVV I+A +HSA ++ + + WG G G
Sbjct: 298 EVFLHGPEESREENLEKVQGLDGLNVVQIAAGAEHSALVTENRVIKTWGWGEHG 351
>emb|CBI32027.3| unnamed protein product [Vitis vinifera]
Length = 405
Score = 421 bits (1083), Expect = e-115
Identities = 209/342 (61%), Positives = 249/342 (72%), Gaps = 5/342 (1%)
Frame = -2
Query: 1013 IWSWGAGTDGQLATGRLQDEHLPQLL--PSFLFPHPISSFSCGGAHVIALLHGGKVLTWG 840
IWSWGAGTDGQL T RL+DEHLPQLL P F PIS +CGGAHV+AL GKV+TWG
Sbjct: 22 IWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTWG 81
Query: 839 RGTSGQLGHGDSLNCSTPMPVEFFQDIVITNASAGWNHSGFVSDKGCLFTCGDGSFGQLG 660
RGTSGQLGHGD ++ P V+ + V+T+ SAGW+HSGFVSD GCLFTCGDGSFGQLG
Sbjct: 82 RGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQLG 141
Query: 659 HGDSKSQLTPTLVSSFVCRRVNKIACGLRHSLALLEGH--SGDQVYGFGSARRGQLGIPH 486
HGD KS +P VS F + V++IACG+RHSL LL+G SGDQVYGFGS +RGQLG+
Sbjct: 142 HGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGTGLSGDQVYGFGSGKRGQLGVSM 201
Query: 485 DSLRYVSTPQSIHGLGDNNVVCISANGDHSAALSTDGHMYIWGRGFAGDSDVCYPQCATS 306
D+ R +S PQ+ GL ++ I ANGDHSAALS +GH+Y WGRGF SDV P+C S
Sbjct: 202 DNTRSISVPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRGFGSTSDVHCPRCLPS 261
Query: 305 SSSVSQVAIGWHHALVLTSDGKVFMFGGSRHGVLSDPLKTSMLTKSSRSAEESNNLVMER 126
S +QVA+GW+H LVLT G+VFM GG+RHGVL DP K S + S + E N +E+
Sbjct: 262 SLCFTQVALGWNHMLVLTGGGEVFMLGGNRHGVLGDPQKGSQVKHLSEESREEN---LEK 318
Query: 125 VPDCDGMKVIQVAAGAEHSALVRED-YAIMTWGWGEHGQLGL 3
V DG+ V+Q+AAGAEHSALV + I TWGWGEHGQLGL
Sbjct: 319 VQGLDGLNVVQIAAGAEHSALVTGNILVIKTWGWGEHGQLGL 360
Score = 73.6 bits (179), Expect = 8e-11
Identities = 79/295 (26%), Positives = 121/295 (41%), Gaps = 70/295 (23%)
Frame = -2
Query: 1016 RIWSWGAGTDGQLATG----RLQDEHLPQLLPSFLFPHPISSFSCGGAHVIALLHGGKVL 849
++ +WG GT GQL G LQ +H+ +LL SF+ H S G +H + G +
Sbjct: 76 KVVTWGRGTSGQLGHGDMVSSLQPKHV-KLLESFVMTH----VSAGWSHSGFVSDTGCLF 130
Query: 848 TWGRGTSGQLGHGDSLNCSTPMPVEFFQDIVITNASAGWNHS-------GFVSDKGCLFT 690
T G G+ GQLGHGD + +P+ V +F + + G HS G D+ ++
Sbjct: 131 TCGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGTGLSGDQ--VYG 188
Query: 689 CGDGSFGQLG----------------------------HGDSKSQLT------------- 633
G G GQLG +GD + L+
Sbjct: 189 FGSGKRGQLGVSMDNTRSISVPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRGFG 248
Query: 632 -------PTLVSSFVCRRVNKIACGLRHSLALLEGHSGDQVYGFGSARRGQLGIPH--DS 480
P + S +C ++A G H L L G +V+ G R G LG P
Sbjct: 249 STSDVHCPRCLPSSLC--FTQVALGWNHMLVLT---GGGEVFMLGGNRHGVLGDPQKGSQ 303
Query: 479 LRYVSTP------QSIHGLGDNNVVCISANGDHSAALSTDGHMYI---WGRGFAG 342
++++S + + GL NVV I+A +HSA ++ G++ + WG G G
Sbjct: 304 VKHLSEESREENLEKVQGLDGLNVVQIAAGAEHSALVT--GNILVIKTWGWGEHG 356
>ref|XP_002321756.1| predicted protein [Populus trichocarpa] gi|222868752|gb|EEF05883.1|
predicted protein [Populus trichocarpa]
Length = 390
Score = 391 bits (1005), Expect = e-106
Identities = 198/343 (57%), Positives = 240/343 (69%), Gaps = 2/343 (0%)
Frame = -2
Query: 1025 QHQRIWSWGAGTDGQLATGRLQDEHLPQLL--PSFLFPHPISSFSCGGAHVIALLHGGKV 852
+ Q+IWSWGAGT+GQL TG+L+DE+LPQLL P IS+ +CGGAHVIAL GG+V
Sbjct: 12 KQQQIWSWGAGTEGQLGTGKLEDEYLPQLLHLPFLSSAESISTLACGGAHVIALTSGGRV 71
Query: 851 LTWGRGTSGQLGHGDSLNCSTPMPVEFFQDIVITNASAGWNHSGFVSDKGCLFTCGDGSF 672
TWGRGT+GQLGHG+ LN P PV Q VIT+ SAGW+HSGFVSD G LFTCGDGSF
Sbjct: 72 FTWGRGTTGQLGHGEMLNSLHPKPVSSLQSCVITHVSAGWSHSGFVSDIGLLFTCGDGSF 131
Query: 671 GQLGHGDSKSQLTPTLVSSFVCRRVNKIACGLRHSLALLEGHSGDQVYGFGSARRGQLGI 492
GQLG G+ +SQ TP V F VN+IACG+RHSL LL +G+QVYGFGS +RGQLGI
Sbjct: 132 GQLGQGNYRSQSTPVKVDYFANNFVNQIACGMRHSLVLL---NGNQVYGFGSGKRGQLGI 188
Query: 491 PHDSLRYVSTPQSIHGLGDNNVVCISANGDHSAALSTDGHMYIWGRGFAGDSDVCYPQCA 312
D + ++ PQ GL D +V ISANGDHSAA+S DGH+Y WGRGFAG SD +PQ +
Sbjct: 189 SRDKTKSINLPQVTCGLEDVQIVSISANGDHSAAISADGHLYTWGRGFAGASDANFPQLS 248
Query: 311 TSSSSVSQVAIGWHHALVLTSDGKVFMFGGSRHGVLSDPLKTSMLTKSSRSAEESNNLVM 132
SS ++ A+GW+H L+LT D +V M GG+ HGVL D K S + E+S +
Sbjct: 249 LSSLRCTKAALGWNHGLLLTGDEEVLMLGGNYHGVLCDLEKMSAV---KHRPEDSPGTAL 305
Query: 131 ERVPDCDGMKVIQVAAGAEHSALVREDYAIMTWGWGEHGQLGL 3
V DG+KV+++AAGAEHSAL TWGWGEHGQLGL
Sbjct: 306 NEVIGLDGVKVVKIAAGAEHSAL--------TWGWGEHGQLGL 340
>ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana] gi|124301018|gb|ABN04761.1| At1g27060
[Arabidopsis thaliana] gi|332192654|gb|AEE30775.1|
regulator of chromosome condensation-like protein
[Arabidopsis thaliana]
Length = 386
Score = 384 bits (985), Expect = e-104
Identities = 196/342 (57%), Positives = 237/342 (69%)
Frame = -2
Query: 1028 KQHQRIWSWGAGTDGQLATGRLQDEHLPQLLPSFLFPHPISSFSCGGAHVIALLHGGKVL 849
++ +++WSWGAGTDGQL T +LQDE LPQLL P IS +CGGAHVIAL GGKV
Sbjct: 12 EEEEQVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPS-ISMLACGGAHVIALTSGGKVF 70
Query: 848 TWGRGTSGQLGHGDSLNCSTPMPVEFFQDIVITNASAGWNHSGFVSDKGCLFTCGDGSFG 669
TWGRG+SGQLGHGD LN + P V FF D VIT A+AGW+HSGFVSD GC+FTCG+GSFG
Sbjct: 71 TWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFG 130
Query: 668 QLGHGDSKSQLTPTLVSSFVCRRVNKIACGLRHSLALLEGHSGDQVYGFGSARRGQLGIP 489
QLGHGD+ S TP VS F V +ACG+RHSL L +G+QV GFGS +RGQLG
Sbjct: 131 QLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLF---AGNQVCGFGSGKRGQLGFS 187
Query: 488 HDSLRYVSTPQSIHGLGDNNVVCISANGDHSAALSTDGHMYIWGRGFAGDSDVCYPQCAT 309
D ++ V+ P + GL D VV ISANGDHSAA+S DG + WGRGF G DV PQ
Sbjct: 188 SDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCGGPDVHAPQSLP 247
Query: 308 SSSSVSQVAIGWHHALVLTSDGKVFMFGGSRHGVLSDPLKTSMLTKSSRSAEESNNLVME 129
S S +VA+GW+HAL+LT DG+VF G + + P K + SS + + E
Sbjct: 248 SPLSFREVAVGWNHALLLTVDGEVFKLGSTLN---KQPEKQQLQIDSSEA-------LFE 297
Query: 128 RVPDCDGMKVIQVAAGAEHSALVREDYAIMTWGWGEHGQLGL 3
+VPD DG+KV+Q+AAGAEHSA V E+ + TWGWGEHGQLGL
Sbjct: 298 KVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGL 339
>ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355514908|gb|AES96531.1| RCC1 and BTB
domain-containing protein [Medicago truncatula]
Length = 615
Score = 381 bits (979), Expect = e-103
Identities = 197/372 (52%), Positives = 241/372 (64%), Gaps = 33/372 (8%)
Frame = -2
Query: 1019 QRIWSWGAGTDGQLATGRLQDEHLPQLLPSFLFPHPISSFSCGGAHVIALLHG------- 861
+R+WSWGAGTDGQL TGRLQDE +PQ L S P +SS +CGGAHVIAL
Sbjct: 211 ERLWSWGAGTDGQLGTGRLQDEQIPQQL-SLSLPS-VSSLACGGAHVIALTSAQMEKVVR 268
Query: 860 -------------------------GKVLTWGRGTSGQLGHGDSLN-CSTPMPVEFFQDI 759
GKVL+WGRG SGQLGHG+ +N P + +
Sbjct: 269 DIDLLECGFKPAILCFTFSVREFRHGKVLSWGRGNSGQLGHGEVVNNLLYPKAITSLDNY 328
Query: 758 VITNASAGWNHSGFVSDKGCLFTCGDGSFGQLGHGDSKSQLTPTLVSSFVCRRVNKIACG 579
IT+ SAGW HSGFVSD GCLFTCGDGSFGQLGHGD S +P VSSFV + V ++ACG
Sbjct: 329 FITHVSAGWGHSGFVSDSGCLFTCGDGSFGQLGHGDYASHSSPIKVSSFVDQNVAQVACG 388
Query: 578 LRHSLALLEGHSGDQVYGFGSARRGQLGIPHDSLRYVSTPQSIHGLGDNNVVCISANGDH 399
+RHSL LL+G +QVYGFGS +RGQLG+ D ++ ++ P+ I G D +V ISANGDH
Sbjct: 389 MRHSLVLLKGCLSNQVYGFGSGKRGQLGVSKDKIKSINLPKVISGFEDEEIVGISANGDH 448
Query: 398 SAALSTDGHMYIWGRGFAGDSDVCYPQCATSSSSVSQVAIGWHHALVLTSDGKVFMFGGS 219
SAALS DGH+Y WGRGF G D PQC S+S ++V +GW+HAL +T +GKV+M GG+
Sbjct: 449 SAALSVDGHLYTWGRGFKGYEDSHLPQCLNSTSKFTKVTLGWNHALAMTGEGKVYMLGGN 508
Query: 218 RHGVLSDPLKTSMLTKSSRSAEESNNLVMERVPDCDGMKVIQVAAGAEHSALVREDYAIM 39
GVLSD L + KS + E+N +E+ P DG K+ +A GAEHS LV E+ I
Sbjct: 509 HLGVLSD-LHNARPAKSLFDSREAN---LEKAPGLDGTKITDIATGAEHSVLVTENGEIK 564
Query: 38 TWGWGEHGQLGL 3
TWGWGEHGQLGL
Sbjct: 565 TWGWGEHGQLGL 576
Score = 93.6 bits (231), Expect = 7e-17
Identities = 86/298 (28%), Positives = 134/298 (44%), Gaps = 24/298 (8%)
Frame = -2
Query: 1025 QHQRIWSWGAGTDGQLATGRLQDEHLPQLLPSFLFPHPISSFSCGGAHVIALLHGGKVLT 846
+H ++ SWG G GQL G + + L + L + I+ S G H + G + T
Sbjct: 292 RHGKVLSWGRGNSGQLGHGEVVNNLLYPKAITSLDNYFITHVSAGWGHSGFVSDSGCLFT 351
Query: 845 WGRGTSGQLGHGDSLNCSTPMPVEFFQDIVITNASAGWNHSGFVSDKGCL----FTCGDG 678
G G+ GQLGHGD + S+P+ V F D + + G HS V KGCL + G G
Sbjct: 352 CGDGSFGQLGHGDYASHSSPIKVSSFVDQNVAQVACGMRHS-LVLLKGCLSNQVYGFGSG 410
Query: 677 SFGQLGHGDS--KSQLTPTLVSSFVCRRVNKIACGLRHSLAL-LEGHSGDQVYGFGSARR 507
GQLG KS P ++S F + I+ HS AL ++GH +Y +G R
Sbjct: 411 KRGQLGVSKDKIKSINLPKVISGFEDEEIVGISANGDHSAALSVDGH----LYTWG---R 463
Query: 506 GQLGIPHDSLRYVSTPQSIHGLGDNNVVCISANGDHSAALSTDGHMYIWGRGFAGD-SDV 330
G G L PQ ++ V + N H+ A++ +G +Y+ G G SD+
Sbjct: 464 GFKGYEDSHL-----PQCLNSTSKFTKVTLGWN--HALAMTGEGKVYMLGGNHLGVLSDL 516
Query: 329 CYPQCATS----------------SSSVSQVAIGWHHALVLTSDGKVFMFGGSRHGVL 204
+ A S + ++ +A G H++++T +G++ +G HG L
Sbjct: 517 HNARPAKSLFDSREANLEKAPGLDGTKITDIATGAEHSVLVTENGEIKTWGWGEHGQL 574