BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036213
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28135.3| unnamed protein product [Vitis vinifera]               80   3e-14
ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containi...    80   3e-14
ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containi...    78   7e-13
gb|ACZ98537.1| PPR motif protein [Malus x domestica]                   77   1e-12
ref|XP_003628782.1| Pentatricopeptide repeat-containing protein ...    71   8e-11

>emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score = 80.1 bits (196), Expect(2) = 3e-14
 Identities = 47/116 (40%), Positives = 65/116 (56%), Gaps = 14/116 (12%)
 Frame = +3

Query: 93   EHCDCVVNLLYKRGKLHSASQHILSITFEADAHM*GSLLAVCREHNEINFGEHITGY*YK 272
            EH  CVV+LL + G L  A + IL++ F+ DAH+ GSLL  CREH+EI  GE+++ + +K
Sbjct: 1788 EHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFK 1847

Query: 273  CP--------------FCC*MWDERSN*KLLMKEKSLIKVPRCNWIQIDEELHVFV 398
                                 W E SN + LMK + L K P C+WIQ   +L+VFV
Sbjct: 1848 LEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFV 1903



 Score = 23.1 bits (48), Expect(2) = 3e-14
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 8/38 (21%)
 Frame = +2

Query: 2    MTFISALSSCSNAG**GN--------VSEYHVNPTTDY 91
            +TF S LS+CS+AG            VS++++NP  ++
Sbjct: 1752 ITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEH 1789


>ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
            chloroplastic-like [Vitis vinifera]
          Length = 858

 Score = 80.1 bits (196), Expect(2) = 3e-14
 Identities = 47/116 (40%), Positives = 65/116 (56%), Gaps = 14/116 (12%)
 Frame = +3

Query: 93   EHCDCVVNLLYKRGKLHSASQHILSITFEADAHM*GSLLAVCREHNEINFGEHITGY*YK 272
            EH  CVV+LL + G L  A + IL++ F+ DAH+ GSLL  CREH+EI  GE+++ + +K
Sbjct: 693  EHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFK 752

Query: 273  CP--------------FCC*MWDERSN*KLLMKEKSLIKVPRCNWIQIDEELHVFV 398
                                 W E SN + LMK + L K P C+WIQ   +L+VFV
Sbjct: 753  LEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFV 808



 Score = 23.1 bits (48), Expect(2) = 3e-14
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 8/38 (21%)
 Frame = +2

Query: 2   MTFISALSSCSNAG**GN--------VSEYHVNPTTDY 91
           +TF S LS+CS+AG            VS++++NP  ++
Sbjct: 657 ITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEH 694


>ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
            chloroplastic-like [Glycine max]
          Length = 805

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 14/116 (12%)
 Frame = +3

Query: 93   EHCDCVVNLLYKRGKLHSASQHILSITFEADAHM*GSLLAVCREHNEINFGEHITGY*YK 272
            EH  C+V LL   G+L  A + IL++    DAH+ GSLL  C ++N+I   ++I  +  K
Sbjct: 666  EHYGCLVKLLANDGQLDEALRTILTMPSHPDAHILGSLLTACGQNNDIELADYIAKWLLK 725

Query: 273  CP--------------FCC*MWDERSN*KLLMKEKSLIKVPRCNWIQIDEELHVFV 398
                                 WD+ SN + LMKEK L K+P C+WI++ +ELHVF+
Sbjct: 726  LDPDNSGNYVALSNVYAAVGKWDKVSNLRGLMKEKGLRKIPGCSWIEVGQELHVFI 781


>gb|ACZ98537.1| PPR motif protein [Malus x domestica]
          Length = 751

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 14/116 (12%)
 Frame = +3

Query: 93  EHCDCVVNLLYKRGKLHSASQHILSITFEADAHM*GSLLAVCREHNEINFGEHITGY*YK 272
           EH  C+V+LL + G L  A   I ++ ++ D  + GSLLA CREHN+I   E+++    K
Sbjct: 610 EHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACREHNKIELEEYLSNQLLK 669

Query: 273 CP--------------FCC*MWDERSN*KLLMKEKSLIKVPRCNWIQIDEELHVFV 398
                                WDE    + LMKE+ L K+P C+WIQ+ EEL+VFV
Sbjct: 670 LQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIPGCSWIQVGEELNVFV 725


>ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355522804|gb|AET03258.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1002

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 14/116 (12%)
 Frame = +3

Query: 93   EHCDCVVNLLYKRGKLHSASQHILSITFEADAHM*GSLLAVCREHNEINFGEHITGY*YK 272
            +H  C+V LL   G+L  A + IL++    DAH+ GSLLA C +++E     +I  +  K
Sbjct: 726  KHYGCLVKLLTNDGQLDEALRIILTMPSPPDAHILGSLLAACGQNHETELANYIAKWLLK 785

Query: 273  CP--------------FCC*MWDERSN*KLLMKEKSLIKVPRCNWIQIDEELHVFV 398
                                 WDE SN +  MKEK L K+P C+WI++ +EL+VF+
Sbjct: 786  VEPNNPGNYVALSNVYAALGKWDEVSNIRGFMKEKGLKKIPGCSWIEVGQELNVFI 841