BLASTX nr result

ID: Bupleurum21_contig00036203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036203
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]   166   2e-39
ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containi...   163   2e-38
emb|CBI39664.3| unnamed protein product [Vitis vinifera]              135   4e-30
ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|2...   135   4e-30
ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28

>emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]
          Length = 730

 Score =  166 bits (419), Expect = 2e-39
 Identities = 80/138 (57%), Positives = 104/138 (75%)
 Frame = -3

Query: 414 LKLFSEVCARSWVLDEFSYAELVQCLCQKEKIHEAVEVFCYMSGKRCSLLSSSFNMLIVG 235
           L+LF +VC+++WVLD  SYAELV+ LCQ E+I EA EVFCYMS  RC+L SSS +ML+ G
Sbjct: 463 LELFHQVCSKNWVLDSASYAELVETLCQMERIQEAAEVFCYMSSNRCALKSSSLDMLMKG 522

Query: 234 LCERGLVESAVRLLSLTNYSGTSCSSATYSAIMFGLFKLKKIDNILMIIARKFVEGCPLD 55
           +C  G V+ A+RLL L  YSGTSC++A+Y AIM GL KL K  +IL+++++  VEGC LD
Sbjct: 523 ICVTGKVDEAIRLLVLACYSGTSCTNASYKAIMLGLSKLGKDSDILVVLSKMLVEGCILD 582

Query: 54  VEAYCIGIQGMIIVGRGE 1
           VEAYCI +Q M  + R E
Sbjct: 583 VEAYCILVQSMCALSRTE 600


>ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62590-like [Vitis vinifera]
          Length = 730

 Score =  163 bits (412), Expect = 2e-38
 Identities = 79/138 (57%), Positives = 103/138 (74%)
 Frame = -3

Query: 414 LKLFSEVCARSWVLDEFSYAELVQCLCQKEKIHEAVEVFCYMSGKRCSLLSSSFNMLIVG 235
           L+LF +VC+++WVLD  SYAELV+ LCQ E+I EA EVFCYMS   C+L SSS +ML+ G
Sbjct: 463 LELFHQVCSKNWVLDSASYAELVETLCQMERIQEAAEVFCYMSSNGCALKSSSLDMLMKG 522

Query: 234 LCERGLVESAVRLLSLTNYSGTSCSSATYSAIMFGLFKLKKIDNILMIIARKFVEGCPLD 55
           +C  G V+ A+RLL L  YSGTSC++A+Y AIM GL KL K  +IL+++++  VEGC LD
Sbjct: 523 ICVTGKVDEAIRLLVLACYSGTSCTNASYKAIMLGLSKLGKDSDILVVLSKMLVEGCILD 582

Query: 54  VEAYCIGIQGMIIVGRGE 1
           VEAYCI +Q M  + R E
Sbjct: 583 VEAYCILVQSMCALSRTE 600


>emb|CBI39664.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  135 bits (339), Expect = 4e-30
 Identities = 67/121 (55%), Positives = 87/121 (71%)
 Frame = -3

Query: 363 SYAELVQCLCQKEKIHEAVEVFCYMSGKRCSLLSSSFNMLIVGLCERGLVESAVRLLSLT 184
           S  +LV+ LCQ E+I EA EVFCYMS   C+L SSS +ML+ G+C  G V+ A+RLL L 
Sbjct: 262 SVHQLVETLCQMERIQEAAEVFCYMSSNGCALKSSSLDMLMKGICVTGKVDEAIRLLVLA 321

Query: 183 NYSGTSCSSATYSAIMFGLFKLKKIDNILMIIARKFVEGCPLDVEAYCIGIQGMIIVGRG 4
            YSGTSC++A+Y AIM GL KL K  +IL+++++  VEGC LDVEAYCI +Q M  + R 
Sbjct: 322 CYSGTSCTNASYKAIMLGLSKLGKDSDILVVLSKMLVEGCILDVEAYCILVQSMCALSRT 381

Query: 3   E 1
           E
Sbjct: 382 E 382


>ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|222857302|gb|EEE94849.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score =  135 bits (339), Expect = 4e-30
 Identities = 71/132 (53%), Positives = 93/132 (70%)
 Frame = -3

Query: 414 LKLFSEVCARSWVLDEFSYAELVQCLCQKEKIHEAVEVFCYMSGKRCSLLSSSFNMLIVG 235
           L+LF ++ A+ W+LD  SY+EL++ LC+ EK  EAV+VFCYMS  RCSL S SFNMLI G
Sbjct: 458 LQLFLQLHAKFWILDPASYSELIEGLCRGEKYLEAVKVFCYMSENRCSLQSLSFNMLIEG 517

Query: 234 LCERGLVESAVRLLSLTNYSGTSCSSATYSAIMFGLFKLKKIDNILMIIARKFVEGCPLD 55
           +C  G++  AVRL  L   SGTSCS+AT + IM GL K  K  ++L  +++  V+G  LD
Sbjct: 518 VCNMGMLNEAVRLQLLGYNSGTSCSNATCNYIMLGLSKSDKGKHMLAFLSQMLVQGTNLD 577

Query: 54  VEAYCIGIQGMI 19
           +EAYCI IQ MI
Sbjct: 578 MEAYCILIQSMI 589


>ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|222871421|gb|EEF08552.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score =  129 bits (325), Expect = 2e-28
 Identities = 67/136 (49%), Positives = 93/136 (68%)
 Frame = -3

Query: 414 LKLFSEVCARSWVLDEFSYAELVQCLCQKEKIHEAVEVFCYMSGKRCSLLSSSFNMLIVG 235
           L+LF ++ A+ W+LD  SY+EL++ LC+ EK  EAV+VFCYMS  RCSL S  F MLI G
Sbjct: 458 LQLFLQLHAKCWILDPASYSELIEGLCRGEKYLEAVKVFCYMSENRCSLQSLPFIMLIKG 517

Query: 234 LCERGLVESAVRLLSLTNYSGTSCSSATYSAIMFGLFKLKKIDNILMIIARKFVEGCPLD 55
           +C+ G++  AVRL SL   SGTSC +ATY+ +M  L K ++  ++L  ++R  V+G  L+
Sbjct: 518 ICDMGMIGEAVRLQSLAYNSGTSCVNATYNYVMLRLSKSEQGRHVLAFLSRMLVQGGNLN 577

Query: 54  VEAYCIGIQGMIIVGR 7
            EAYCI IQ +I   R
Sbjct: 578 TEAYCILIQSLIAQNR 593


Top