BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036196
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321582.1| rna-dependent RNA polymerase [Populus tricho...   329   3e-88
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...   311   5e-83
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...   310   1e-82
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici...   310   2e-82
ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   306   2e-81

>ref|XP_002321582.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222868578|gb|EEF05709.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1110

 Score =  329 bits (843), Expect = 3e-88
 Identities = 160/209 (76%), Positives = 182/209 (87%)
 Frame = -1

Query: 627  EDWSKLHSHTVSTSTQKGIYAKPCRTAIYHRVLSVLRDGLVIGAKRFQFLAFSASQLRSN 448
            EDWSKL ++ +STS Q+GI+AKP RT IYHR+LS+LRDG VIGAKRF+FLAFSASQLRSN
Sbjct: 410  EDWSKLPANAISTSIQRGIFAKPFRTGIYHRILSILRDGFVIGAKRFEFLAFSASQLRSN 469

Query: 447  SVWMFASNEYVSAEYIRDWMGCFDKIRSVSKCAARMGQLFSSSMQTLEVPERDVEVIPDV 268
            SVWMFASN  V AE IR WMGCFDKIRSVSKCAARMGQLFSSS+QT  VP +DVE+IPD+
Sbjct: 470  SVWMFASNNGVKAEDIRKWMGCFDKIRSVSKCAARMGQLFSSSLQTFVVPVQDVEIIPDI 529

Query: 267  EVVSDGVEYCFSDGIGKISYSFAKVVAKMCGLSHIPSAFQIRFGGYKGVLAVHRDSMKKL 88
            EV +DG++YCFSDGIGKIS SFAK VA  CGLSH PSAFQIR+GGYKGV+AV R+S +KL
Sbjct: 530  EVTTDGIDYCFSDGIGKISLSFAKQVAHKCGLSHTPSAFQIRYGGYKGVVAVDRNSFRKL 589

Query: 87   SLRSSMQKFDSDNRMLSITSWSESNFCML 1
            SLRSSM KFDS+NRML++T WSES  C L
Sbjct: 590  SLRSSMLKFDSENRMLNVTKWSESMPCYL 618


>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
            gi|297733815|emb|CBI15062.3| unnamed protein product
            [Vitis vinifera]
          Length = 1127

 Score =  311 bits (798), Expect = 5e-83
 Identities = 154/209 (73%), Positives = 176/209 (84%)
 Frame = -1

Query: 627  EDWSKLHSHTVSTSTQKGIYAKPCRTAIYHRVLSVLRDGLVIGAKRFQFLAFSASQLRSN 448
            EDWSKL S+ +S S +K  +A P RT IYHR+LS+LR+G+VIGAKRFQFLAFSASQLRSN
Sbjct: 415  EDWSKLPSNALSMSIRKAFFADPFRTEIYHRILSILREGIVIGAKRFQFLAFSASQLRSN 474

Query: 447  SVWMFASNEYVSAEYIRDWMGCFDKIRSVSKCAARMGQLFSSSMQTLEVPERDVEVIPDV 268
            SVWMFASN+ V  + IR+WMGCF KIRSVSKCAARMGQLFSSS+QTL VP +DVEVIPD+
Sbjct: 475  SVWMFASNDKVRVDDIREWMGCFKKIRSVSKCAARMGQLFSSSVQTLPVPVQDVEVIPDI 534

Query: 267  EVVSDGVEYCFSDGIGKISYSFAKVVAKMCGLSHIPSAFQIRFGGYKGVLAVHRDSMKKL 88
            EV SDG  YCFSDGIGKIS SFAK VA+ CGL   PSAFQIR+GGYKGV+AV R+S +KL
Sbjct: 535  EVTSDGFGYCFSDGIGKISLSFAKQVAQKCGLHQTPSAFQIRYGGYKGVIAVDRNSFRKL 594

Query: 87   SLRSSMQKFDSDNRMLSITSWSESNFCML 1
            SLRSSM KF+S NRML++T WSES  C L
Sbjct: 595  SLRSSMLKFESQNRMLNVTKWSESTPCYL 623


>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score =  310 bits (794), Expect = 1e-82
 Identities = 150/209 (71%), Positives = 177/209 (84%)
 Frame = -1

Query: 627  EDWSKLHSHTVSTSTQKGIYAKPCRTAIYHRVLSVLRDGLVIGAKRFQFLAFSASQLRSN 448
            EDW KL  + +S S ++GI+AKP RT IYHR+LS+LRDGLVIG+KRF FLAFSASQLRSN
Sbjct: 418  EDWGKLSPNAISMSVEQGIFAKPYRTKIYHRILSILRDGLVIGSKRFLFLAFSASQLRSN 477

Query: 447  SVWMFASNEYVSAEYIRDWMGCFDKIRSVSKCAARMGQLFSSSMQTLEVPERDVEVIPDV 268
            SVWMFASNE+V AE IR+WMGCF+KIRSVSKCAARMGQLFS+S QT+EV    VE++PD+
Sbjct: 478  SVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEILPDI 537

Query: 267  EVVSDGVEYCFSDGIGKISYSFAKVVAKMCGLSHIPSAFQIRFGGYKGVLAVHRDSMKKL 88
            EV SDGV YCFSDGIGKIS +FA  VA+ CGLS+ PSAFQIR+GGYKGV+AV R+S +KL
Sbjct: 538  EVTSDGVSYCFSDGIGKISQAFASQVAQKCGLSYTPSAFQIRYGGYKGVIAVDRNSFRKL 597

Query: 87   SLRSSMQKFDSDNRMLSITSWSESNFCML 1
            SLR SM KF+S NRML+IT WS++  C L
Sbjct: 598  SLRGSMLKFESKNRMLNITKWSDAMPCYL 626


>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223550546|gb|EEF52033.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 983

 Score =  310 bits (793), Expect = 2e-82
 Identities = 148/209 (70%), Positives = 178/209 (85%)
 Frame = -1

Query: 627 EDWSKLHSHTVSTSTQKGIYAKPCRTAIYHRVLSVLRDGLVIGAKRFQFLAFSASQLRSN 448
           EDWSKL ++ +S S Q+GI+AKP RT IYHR+LS+LRDG+VIGAK+F+FLAFSASQLRSN
Sbjct: 265 EDWSKLPANAISMSIQRGIFAKPFRTGIYHRILSILRDGIVIGAKKFEFLAFSASQLRSN 324

Query: 447 SVWMFASNEYVSAEYIRDWMGCFDKIRSVSKCAARMGQLFSSSMQTLEVPERDVEVIPDV 268
           SVWMFASN+   AE IR+WMGCF+KI S+SKCAARMGQLFSSS QT  V  +D+E+IPD+
Sbjct: 325 SVWMFASNDKKKAEEIREWMGCFNKIHSISKCAARMGQLFSSSKQTFIVSPQDMEIIPDI 384

Query: 267 EVVSDGVEYCFSDGIGKISYSFAKVVAKMCGLSHIPSAFQIRFGGYKGVLAVHRDSMKKL 88
           EV SDG+ YCFSDGIGKIS SFA+ VA+ CGL+  PSAFQIR+GGYKGV+AV R+S +KL
Sbjct: 385 EVTSDGINYCFSDGIGKISLSFARQVAQKCGLNRTPSAFQIRYGGYKGVIAVDRNSFRKL 444

Query: 87  SLRSSMQKFDSDNRMLSITSWSESNFCML 1
           SLR SM KF+S+NRML++T WSES  C L
Sbjct: 445 SLRDSMCKFESENRMLNVTKWSESMPCYL 473


>ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cucumis sativus]
          Length = 1117

 Score =  306 bits (785), Expect = 2e-81
 Identities = 148/209 (70%), Positives = 179/209 (85%)
 Frame = -1

Query: 627  EDWSKLHSHTVSTSTQKGIYAKPCRTAIYHRVLSVLRDGLVIGAKRFQFLAFSASQLRSN 448
            EDWSKL +  V+TS Q+GI +KP RT IYHR+++VLRDG+VIGAKRF+FLAFSASQLRSN
Sbjct: 415  EDWSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSN 474

Query: 447  SVWMFASNEYVSAEYIRDWMGCFDKIRSVSKCAARMGQLFSSSMQTLEVPERDVEVIPDV 268
            SVWMFAS++ + AE IR WMGCF+KIRS+SKCAARMGQLFSSS QTL VP RDVE+IPD+
Sbjct: 475  SVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDI 534

Query: 267  EVVSDGVEYCFSDGIGKISYSFAKVVAKMCGLSHIPSAFQIRFGGYKGVLAVHRDSMKKL 88
            EV +DG++YCFSDGIGKIS SFA+ VA  CG++HIPSAFQIR+GGYKGV+AV R+S +KL
Sbjct: 535  EVNTDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKL 594

Query: 87   SLRSSMQKFDSDNRMLSITSWSESNFCML 1
            SLR SM KF+S N+ML++T   +S  C L
Sbjct: 595  SLRDSMLKFESKNKMLNVTKCCDSMPCYL 623