BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036135
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]   168   4e-40
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...   150   1e-34
ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   140   1e-31
gb|AFK47046.1| unknown [Lotus japonicus]                              140   1e-31

>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score =  170 bits (431), Expect = 1e-40
 Identities = 83/136 (61%), Positives = 100/136 (73%)
 Frame = -2

Query: 419 AYIVAAKGYLRVRNKVKAVESLKKSEQFVPVRSRNFAYEIYMTMYARMGNKKEVYRIWNL 240
           AYIVAA GYL+   K KAVE LKKSEQF+  RSR F YEI +T+YA MGNK EVYRIWNL
Sbjct: 243 AYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTLYATMGNKTEVYRIWNL 302

Query: 239 YKIHCKFYNMGYLCMMSSLAKLDDLEAAQKVYDEWEMKKANFDIRLPNFLISAYCKKGLL 60
           YK   KF+N GY+ M+SSL KLDD++ A+K ++EW      FD R+PN LI AYCKKGLL
Sbjct: 303 YKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLL 362

Query: 59  EEAESVYHRLLRNGKE 12
           E+AE +  R +  G+E
Sbjct: 363 EKAEQLVSRAIEQGEE 378


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score =  168 bits (426), Expect = 4e-40
 Identities = 82/136 (60%), Positives = 99/136 (72%)
 Frame = -2

Query: 419 AYIVAAKGYLRVRNKVKAVESLKKSEQFVPVRSRNFAYEIYMTMYARMGNKKEVYRIWNL 240
           AYIVAA GYL+   K KAVE LKKSEQF+  RSR F YEI +T+YA MGNK E YRIWNL
Sbjct: 243 AYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTLYATMGNKTEXYRIWNL 302

Query: 239 YKIHCKFYNMGYLCMMSSLAKLDDLEAAQKVYDEWEMKKANFDIRLPNFLISAYCKKGLL 60
           YK   KF+N GY+ M+SSL KLDD++ A+K ++EW      FD R+PN LI AYCKKGLL
Sbjct: 303 YKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLL 362

Query: 59  EEAESVYHRLLRNGKE 12
           E+AE +  R +  G+E
Sbjct: 363 EKAEQLVSRAIEQGEE 378


>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  150 bits (378), Expect = 1e-34
 Identities = 66/139 (47%), Positives = 101/139 (72%)
 Frame = -2

Query: 419 AYIVAAKGYLRVRNKVKAVESLKKSEQFVPVRSRNFAYEIYMTMYARMGNKKEVYRIWNL 240
           AY++AA GYL+     K +  LK+SEQ +   +R FAYE  +T+Y   GNK EVYRIWN 
Sbjct: 248 AYVIAANGYLKAGLVDKTLIMLKRSEQLISGNTRRFAYEFLLTLYTASGNKAEVYRIWNK 307

Query: 239 YKIHCKFYNMGYLCMMSSLAKLDDLEAAQKVYDEWEMKKANFDIRLPNFLISAYCKKGLL 60
           YK   +F+N GY+CM+SSL KLDD++ A+++++EW+ KK  FDIR+PN +++ Y +KG L
Sbjct: 308 YKEIGRFFNSGYICMISSLLKLDDIDGAERIFEEWDSKKVLFDIRIPNSMVNVYSRKGHL 367

Query: 59  EEAESVYHRLLRNGKEANA 3
           E+AE+  ++++ +G+E +A
Sbjct: 368 EKAETYINKIVASGEEPDA 386


>ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g20710, mitochondrial-like [Glycine max]
          Length = 482

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/135 (51%), Positives = 90/135 (66%)
 Frame = -2

Query: 416 YIVAAKGYLRVRNKVKAVESLKKSEQFVPVRSRNFAYEIYMTMYARMGNKKEVYRIWNLY 237
           Y+ AA GY RV N  K  E LKKSE      +R  A+E   TMYA +GNK EVYR+WN+ 
Sbjct: 231 YMTAANGYRRVHNFEKVAEMLKKSEHLARGNTRRLAFESIQTMYAIIGNKDEVYRLWNMC 290

Query: 236 KIHCKFYNMGYLCMMSSLAKLDDLEAAQKVYDEWEMKKANFDIRLPNFLISAYCKKGLLE 57
               K  N  Y+ M+SSLAKLD+++ A+K+ +EWE K ANFD+R+PN +ISAYCK G  +
Sbjct: 291 TSLKKPNNSSYIRMLSSLAKLDEIDGAEKILEEWESKYANFDVRIPNLMISAYCKWGQFD 350

Query: 56  EAESVYHRLLRNGKE 12
           +AE+   RLL  GK+
Sbjct: 351 KAEAYIRRLLDGGKQ 365


>gb|AFK47046.1| unknown [Lotus japonicus]
          Length = 496

 Score =  140 bits (352), Expect = 1e-31
 Identities = 67/135 (49%), Positives = 91/135 (67%)
 Frame = -2

Query: 416 YIVAAKGYLRVRNKVKAVESLKKSEQFVPVRSRNFAYEIYMTMYARMGNKKEVYRIWNLY 237
           Y  AA GYL+  N  KA+ +LKKSEQ V  +    AYE   + YA +GNK EVYR+WN  
Sbjct: 243 YSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQSTYAAIGNKDEVYRLWNRI 302

Query: 236 KIHCKFYNMGYLCMMSSLAKLDDLEAAQKVYDEWEMKKANFDIRLPNFLISAYCKKGLLE 57
           K     +N  Y+CM+SSL KLDD + A+K+  EWE +  NFD R+PN +I+AYCK+GLL+
Sbjct: 303 KNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFDTRIPNLMITAYCKRGLLD 362

Query: 56  EAESVYHRLLRNGKE 12
           +AE+   +LL +GK+
Sbjct: 363 KAEAYIQKLLDSGKK 377