BLASTX nr result
ID: Bupleurum21_contig00036104
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00036104 (613 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 93 3e-17 ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|2... 93 3e-17 ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 92 6e-17 ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 92 1e-16 ref|XP_004167588.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 86 5e-15 >ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine max] Length = 528 Score = 93.2 bits (230), Expect = 3e-17 Identities = 45/64 (70%), Positives = 51/64 (79%) Frame = -3 Query: 611 IGRASRMGEEGKSIVFVNEENKKLFPELVEILKSSGAPVPRELANSRYLMXXXXXSRGNK 432 IGRASRMGEEG+ IVFVNEENK +F EL+E+LKS GA VPRELANSRY +G+K Sbjct: 463 IGRASRMGEEGQGIVFVNEENKNIFAELIEVLKSGGAAVPRELANSRYATGVFSGGKGSK 522 Query: 431 KRKH 420 KRKH Sbjct: 523 KRKH 526 >ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|222861172|gb|EEE98714.1| predicted protein [Populus trichocarpa] Length = 524 Score = 93.2 bits (230), Expect = 3e-17 Identities = 44/65 (67%), Positives = 53/65 (81%) Frame = -3 Query: 611 IGRASRMGEEGKSIVFVNEENKKLFPELVEILKSSGAPVPRELANSRYLMXXXXXSRGNK 432 IGRASRMGE+G SIVFVNEEN+ LFP+LVE+LKSSGA +PREL NSRY+ +G + Sbjct: 459 IGRASRMGEDGTSIVFVNEENRNLFPDLVEVLKSSGAVIPRELVNSRYVKRSFPMGKGQR 518 Query: 431 KRKHG 417 KRK+G Sbjct: 519 KRKYG 523 >ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis vinifera] Length = 540 Score = 92.4 bits (228), Expect = 6e-17 Identities = 47/68 (69%), Positives = 54/68 (79%), Gaps = 3/68 (4%) Frame = -3 Query: 611 IGRASRMGEEGKSIVFVNEENKKLFPELVEILKSSGAPVPRELANSRYLMXXXXXSRG-- 438 IGRASR+GEEG +I+F+NEEN+ LFPELVEILKSSGA +PRELANSRY + RG Sbjct: 472 IGRASRLGEEGTAILFLNEENRNLFPELVEILKSSGAAIPRELANSRYRLGSVNVGRGQI 531 Query: 437 -NKKRKHG 417 KKRKHG Sbjct: 532 RQKKRKHG 539 >ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine max] Length = 528 Score = 91.7 bits (226), Expect = 1e-16 Identities = 44/64 (68%), Positives = 51/64 (79%) Frame = -3 Query: 611 IGRASRMGEEGKSIVFVNEENKKLFPELVEILKSSGAPVPRELANSRYLMXXXXXSRGNK 432 IGRASRMGEEG+ IVFVNEENK +F EL+++LKS GA VPRELANSRY +G+K Sbjct: 463 IGRASRMGEEGQGIVFVNEENKNVFAELIDVLKSGGAAVPRELANSRYATRVFSGGKGSK 522 Query: 431 KRKH 420 KRKH Sbjct: 523 KRKH 526 >ref|XP_004167588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Cucumis sativus] Length = 532 Score = 85.9 bits (211), Expect = 5e-15 Identities = 42/64 (65%), Positives = 50/64 (78%) Frame = -3 Query: 611 IGRASRMGEEGKSIVFVNEENKKLFPELVEILKSSGAPVPRELANSRYLMXXXXXSRGNK 432 IGRASR+GEEGK+IVFVNEENK LF +LVE LKSSGAP+PREL NS + ++ K Sbjct: 468 IGRASRLGEEGKAIVFVNEENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQK 527 Query: 431 KRKH 420 KRK+ Sbjct: 528 KRKY 531