BLASTX nr result

ID: Bupleurum21_contig00036104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036104
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    93   3e-17
ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    92   6e-17
ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    92   1e-16
ref|XP_004167588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    86   5e-15

>ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine
           max]
          Length = 528

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 45/64 (70%), Positives = 51/64 (79%)
 Frame = -3

Query: 611 IGRASRMGEEGKSIVFVNEENKKLFPELVEILKSSGAPVPRELANSRYLMXXXXXSRGNK 432
           IGRASRMGEEG+ IVFVNEENK +F EL+E+LKS GA VPRELANSRY        +G+K
Sbjct: 463 IGRASRMGEEGQGIVFVNEENKNIFAELIEVLKSGGAAVPRELANSRYATGVFSGGKGSK 522

Query: 431 KRKH 420
           KRKH
Sbjct: 523 KRKH 526


>ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|222861172|gb|EEE98714.1|
           predicted protein [Populus trichocarpa]
          Length = 524

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 44/65 (67%), Positives = 53/65 (81%)
 Frame = -3

Query: 611 IGRASRMGEEGKSIVFVNEENKKLFPELVEILKSSGAPVPRELANSRYLMXXXXXSRGNK 432
           IGRASRMGE+G SIVFVNEEN+ LFP+LVE+LKSSGA +PREL NSRY+       +G +
Sbjct: 459 IGRASRMGEDGTSIVFVNEENRNLFPDLVEVLKSSGAVIPRELVNSRYVKRSFPMGKGQR 518

Query: 431 KRKHG 417
           KRK+G
Sbjct: 519 KRKYG 523


>ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis
           vinifera]
          Length = 540

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 47/68 (69%), Positives = 54/68 (79%), Gaps = 3/68 (4%)
 Frame = -3

Query: 611 IGRASRMGEEGKSIVFVNEENKKLFPELVEILKSSGAPVPRELANSRYLMXXXXXSRG-- 438
           IGRASR+GEEG +I+F+NEEN+ LFPELVEILKSSGA +PRELANSRY +      RG  
Sbjct: 472 IGRASRLGEEGTAILFLNEENRNLFPELVEILKSSGAAIPRELANSRYRLGSVNVGRGQI 531

Query: 437 -NKKRKHG 417
             KKRKHG
Sbjct: 532 RQKKRKHG 539


>ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine
           max]
          Length = 528

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 44/64 (68%), Positives = 51/64 (79%)
 Frame = -3

Query: 611 IGRASRMGEEGKSIVFVNEENKKLFPELVEILKSSGAPVPRELANSRYLMXXXXXSRGNK 432
           IGRASRMGEEG+ IVFVNEENK +F EL+++LKS GA VPRELANSRY        +G+K
Sbjct: 463 IGRASRMGEEGQGIVFVNEENKNVFAELIDVLKSGGAAVPRELANSRYATRVFSGGKGSK 522

Query: 431 KRKH 420
           KRKH
Sbjct: 523 KRKH 526


>ref|XP_004167588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Cucumis
           sativus]
          Length = 532

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 42/64 (65%), Positives = 50/64 (78%)
 Frame = -3

Query: 611 IGRASRMGEEGKSIVFVNEENKKLFPELVEILKSSGAPVPRELANSRYLMXXXXXSRGNK 432
           IGRASR+GEEGK+IVFVNEENK LF +LVE LKSSGAP+PREL NS +       ++  K
Sbjct: 468 IGRASRLGEEGKAIVFVNEENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQK 527

Query: 431 KRKH 420
           KRK+
Sbjct: 528 KRKY 531


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