BLASTX nr result

ID: Bupleurum21_contig00036036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036036
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269054.2| PREDICTED: TMV resistance protein N-like [Vi...   164   1e-38
ref|XP_002269168.2| PREDICTED: TMV resistance protein N-like [Vi...   164   2e-38
gb|ABB82032.1| TIR-NBS disease resistance-like protein [Populus ...   162   7e-38
ref|XP_003633500.1| PREDICTED: TMV resistance protein N-like [Vi...   161   1e-37
emb|CAN69843.1| hypothetical protein VITISV_019700 [Vitis vinifera]   160   2e-37

>ref|XP_002269054.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1695

 Score =  164 bits (416), Expect = 1e-38
 Identities = 85/181 (46%), Positives = 122/181 (67%), Gaps = 3/181 (1%)
 Frame = -2

Query: 538 LSSVLNSPPFGGWNVFLSFSGVDTLYNFTSHLYSALVRHGVPTFMDDTELERGPGISDVS 359
           ++S   S   G ++VFLSF G DT Y+FT HLYSAL  +GV TF DD ELERG  I+   
Sbjct: 1   MASPSTSSHEGIYDVFLSFRGEDTRYHFTDHLYSALRDNGVHTFRDDEELERGDVIAPGL 60

Query: 358 TQAIQKSKIYVVVFSKNYAASPRCLDQLVEILQCSNSMGRLVLPLYYNIEPSVVRTQSGS 179
            +AI++S+I +VVFS+ YA S  CLD+LV+I++C     ++VLP++Y+++PS VR Q GS
Sbjct: 61  LKAIEQSRISIVVFSEKYAQSRWCLDELVKIIECMTERKQIVLPVFYHVDPSHVRKQMGS 120

Query: 178 FKEAFEQHEYHYDV---NRLDKWRVALMNVWNLSGYILLNNMSEADIINQVVDRALLELN 8
           + EAF  HE   D+    ++ KWR AL    NLSG+ L +N SE+++I ++ D+ +  LN
Sbjct: 121 YGEAFADHEKDADLKKREKIQKWRTALTETSNLSGWHLRDNQSESNVIKEITDKIITRLN 180

Query: 7   P 5
           P
Sbjct: 181 P 181


>ref|XP_002269168.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 992

 Score =  164 bits (414), Expect = 2e-38
 Identities = 83/181 (45%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
 Frame = -2

Query: 538 LSSVLNSPPFGGWNVFLSFSGVDTLYNFTSHLYSALVRHGVPTFMDDTELERGPGISDVS 359
           ++S   S   G ++VFL+F G DT Y+FT HLYS L ++ V TF DD ELERG  I+   
Sbjct: 1   MASASTSTHVGIYDVFLNFRGADTRYHFTDHLYSELRKNDVRTFRDDEELERGDVIAPGL 60

Query: 358 TQAIQKSKIYVVVFSKNYAASPRCLDQLVEILQCSNSMGRLVLPLYYNIEPSVVRTQSGS 179
            +AI++S+I +VVFS+NYA S  CLD+LV+I++C     ++VLP++Y+++PS VR Q GS
Sbjct: 61  LKAIEQSRISIVVFSENYAQSRWCLDELVKIIECRTEREQIVLPVFYHVDPSHVRKQMGS 120

Query: 178 FKEAFEQHEYHYDV---NRLDKWRVALMNVWNLSGYILLNNMSEADIINQVVDRALLELN 8
           + EAF  HE   D+    ++ KWR AL    NLSG+ LL+N  E+D+I+ + +  +  LN
Sbjct: 121 YGEAFADHEKDADLKKREKIQKWRTALTETSNLSGWRLLDNQYESDVIDDITNNIITRLN 180

Query: 7   P 5
           P
Sbjct: 181 P 181


>gb|ABB82032.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 509

 Score =  162 bits (409), Expect = 7e-38
 Identities = 87/175 (49%), Positives = 119/175 (68%), Gaps = 3/175 (1%)
 Frame = -2

Query: 520 SPPFGGWNVFLSFSGVDTLYNFTSHLYSALVRHGVPTFMDDTELERGPGISDVSTQAIQK 341
           S P G ++VFLSF G DT   FT HLY+ALV+ G+ TF DD EL RG  ISD   +AIQ+
Sbjct: 9   SRPVGAYDVFLSFRGEDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISDHLLRAIQE 68

Query: 340 SKIYVVVFSKNYAASPRCLDQLVEILQCSN-SMGRLVLPLYYNIEPSVVRTQSGSFKEAF 164
           SKI +VVFSK YA+S  CL++LVEIL+C N   G++VLP++Y+I+PS VR Q+GSF E F
Sbjct: 69  SKISIVVFSKGYASSRWCLNELVEILKCKNRKTGQIVLPIFYDIDPSDVRKQTGSFAEPF 128

Query: 163 EQHEYHYDVNRLDKWRVALMNVWNLSGYIL--LNNMSEADIINQVVDRALLELNP 5
           ++HE  ++   + +WR AL     LSG+ L  + N  EA  I +++   L +L+P
Sbjct: 129 DKHEERFEEKLVKEWRKALEEAGKLSGWNLNDMANGHEAKFIKEIIKDVLNKLDP 183


>ref|XP_003633500.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 852

 Score =  161 bits (407), Expect = 1e-37
 Identities = 82/168 (48%), Positives = 113/168 (67%), Gaps = 3/168 (1%)
 Frame = -2

Query: 502 WNVFLSFSGVDTLYNFTSHLYSALVRHGVPTFMDDTELERGPGISDVSTQAIQKSKIYVV 323
           + VFLSF G DT Y FT HLY AL+  G+ TF DD EL RG  I+    +AI++SKI+V+
Sbjct: 25  YEVFLSFRGEDTRYGFTDHLYEALISCGIRTFRDDEELARGGIIASELLEAIEESKIFVI 84

Query: 322 VFSKNYAASPRCLDQLVEILQCSNSMGRLVLPLYYNIEPSVVRTQSGSFKEAFEQHEYHY 143
           +FS+NYAAS  CLD+LV+I +C  + GR +LP++Y+++PS VR Q GS+++AF  HE   
Sbjct: 85  IFSENYAASRWCLDELVKISECGATEGRRILPIFYHVDPSHVRKQRGSYEKAFVDHEKEA 144

Query: 142 DV---NRLDKWRVALMNVWNLSGYILLNNMSEADIINQVVDRALLELN 8
           D     ++ KWR AL  V NL+GY L     EA +I +++D  L ELN
Sbjct: 145 DEEKREKIQKWRSALAKVGNLAGYDLQKYQYEARLIKEIIDVILKELN 192


>emb|CAN69843.1| hypothetical protein VITISV_019700 [Vitis vinifera]
          Length = 1284

 Score =  160 bits (405), Expect = 2e-37
 Identities = 80/168 (47%), Positives = 111/168 (66%), Gaps = 3/168 (1%)
 Frame = -2

Query: 502 WNVFLSFSGVDTLYNFTSHLYSALVRHGVPTFMDDTELERGPGISDVSTQAIQKSKIYVV 323
           + VFLSF G DT Y FT HLY A + HG+ TF DD ELERG  I+     AI++SKI+V+
Sbjct: 25  YEVFLSFRGEDTRYGFTDHLYEAFISHGIRTFRDDEELERGGMIASDILNAIEESKIFVI 84

Query: 322 VFSKNYAASPRCLDQLVEILQCSNSMGRLVLPLYYNIEPSVVRTQSGSFKEAFEQHEYHY 143
           +FS+NYA S  CLD+LV I +C+ +  RL+LP++Y+++PS V  QSGS+++AF  HE   
Sbjct: 85  IFSENYATSRWCLDELVRIFECTATEKRLILPVFYHVDPSEVGEQSGSYEKAFVDHEKEA 144

Query: 142 DVNR---LDKWRVALMNVWNLSGYILLNNMSEADIINQVVDRALLELN 8
           D  +   + KWR+AL    NL+GY L     E  +I +++D  L ELN
Sbjct: 145 DEEKKEEIQKWRIALRKAANLAGYDLQKYGYETRLIKEIIDVILRELN 192


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