BLASTX nr result

ID: Bupleurum21_contig00036033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036033
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    63   3e-08
ref|XP_003604713.1| hypothetical protein MTR_4g016830 [Medicago ...    62   5e-08
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    62   5e-08
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]    62   6e-08
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    60   1e-07

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/82 (40%), Positives = 44/82 (53%)
 Frame = +3

Query: 42  EAIGVLEALSWVHSLDIQNVHVETDSLLTAAAIRNSKPNLLEVGNVIEECKVWLQERRDI 221
           EA+GV E LSW+H      + VETD L    AI++        G +I +C   LQ   D+
Sbjct: 716 EALGVREVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDV 775

Query: 222 SLGYARKQTNKAAHMLAHNPCS 287
            + YAR+  N AAH LA+  CS
Sbjct: 776 QVVYARRSANSAAHCLANGACS 797


>ref|XP_003604713.1| hypothetical protein MTR_4g016830 [Medicago truncatula]
           gi|355505768|gb|AES86910.1| hypothetical protein
           MTR_4g016830 [Medicago truncatula]
          Length = 108

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/82 (39%), Positives = 46/82 (56%)
 Frame = +3

Query: 27  SVFEAEAIGVLEALSWVHSLDIQNVHVETDSLLTAAAIRNSKPNLLEVGNVIEECKVWLQ 206
           +V EAEA  + EA+    SL  Q V  ETD +  A AI  +  +L EVG++I +C+  L 
Sbjct: 2   TVLEAEATALSEAIKLAISLGFQTVRFETDCMTLADAIHTTSAHLNEVGDIISQCRGLLF 61

Query: 207 ERRDISLGYARKQTNKAAHMLA 272
              D  + Y R+Q N+ AH +A
Sbjct: 62  TNTDFKVSYIRRQANRVAHSIA 83


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/87 (32%), Positives = 50/87 (57%)
 Frame = +3

Query: 12  FDGKSSVFEAEAIGVLEALSWVHSLDIQNVHVETDSLLTAAAIRNSKPNLLEVGNVIEEC 191
           ++G     EAEA+G+ +A+ W+  L++ NV +E D  L   +I +   N  E G++I++C
Sbjct: 101 YEGCPPPQEAEAVGLRDAILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDC 160

Query: 192 KVWLQERRDISLGYARKQTNKAAHMLA 272
           +  LQ+  +  + + R+Q N  AH  A
Sbjct: 161 RSLLQQFTNFKISFVRRQANVVAHSFA 187


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/77 (41%), Positives = 43/77 (55%)
 Frame = +3

Query: 42   EAIGVLEALSWVHSLDIQNVHVETDSLLTAAAIRNSKPNLLEVGNVIEECKVWLQERRDI 221
            EA+GV E LSW+H      + VETD LL   AI++     +  G +I +C   LQ   D+
Sbjct: 1689 EALGVREVLSWIHERSRSRIVVETDCLLVVQAIQHKSCPNMSFGFIIADCLDVLQHLVDV 1748

Query: 222  SLGYARKQTNKAAHMLA 272
             + YAR+  N AAH LA
Sbjct: 1749 QVVYARRSANSAAHCLA 1765


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/85 (41%), Positives = 49/85 (57%)
 Frame = +3

Query: 18  GKSSVFEAEAIGVLEALSWVHSLDIQNVHVETDSLLTAAAIRNSKPNLLEVGNVIEECKV 197
           G  +V  AEAIG+ EA+ WV SL   NV  E D+ +   A+ +   +L E G VI +C++
Sbjct: 214 GLFNVKLAEAIGLREAVQWVLSLGRSNVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRL 273

Query: 198 WLQERRDISLGYARKQTNKAAHMLA 272
            LQ   + S+ + RKQ N  AH LA
Sbjct: 274 LLQHGCNYSVQFIRKQANLVAHSLA 298


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