BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00036021
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containi...   206   2e-51
emb|CBI30968.3| unnamed protein product [Vitis vinifera]              187   6e-46
ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containi...   186   2e-45
ref|XP_002531058.1| pentatricopeptide repeat-containing protein,...   185   4e-45
ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   176   2e-42

>ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  206 bits (524), Expect = 2e-51
 Identities = 102/122 (83%), Positives = 108/122 (88%)
 Frame = -3

Query: 366 PDNFTYPFLLKAIAKLMAVREGEKVHGITVRNGYESLVFVQNTLVHVYAACGQAESAHKM 187
           PD  TYPFLLKAIAKLM VREGEKVH I +RNG+ESLVFVQNTLVH+YAACG AESAHK+
Sbjct: 138 PDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKL 197

Query: 186 FELMPERNLVTWNSVINGFALNSRPNETLTLFREMVHEGVERDGFTMVSLLTVCAELGAL 7
           FELM ERNLVTWNSVING+ALN RPNE LTLFREM   GVE DGFTMVSLL+ CAELGAL
Sbjct: 198 FELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGAL 257

Query: 6   AL 1
           AL
Sbjct: 258 AL 259



 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/128 (37%), Positives = 70/128 (54%)
 Frame = -3

Query: 396 FFRMQSFGVWPDNFTYPFLLKAIAKLMAVREGEKVHGITVRNGYESLVFVQNTLVHVYAA 217
           F  M   GV PD FT   LL A A+L A+  G + H   V+ G +  +   N L+ +YA 
Sbjct: 229 FREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAK 288

Query: 216 CGQAESAHKMFELMPERNLVTWNSVINGFALNSRPNETLTLFREMVHEGVERDGFTMVSL 37
           CG    AHK+F+ M E+++V+W S+I G A+N    E L LF+E+  +G+     T V +
Sbjct: 289 CGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGV 348

Query: 36  LTVCAELG 13
           L  C+  G
Sbjct: 349 LYACSHCG 356


>emb|CBI30968.3| unnamed protein product [Vitis vinifera]
          Length = 1434

 Score =  187 bits (476), Expect = 6e-46
 Identities = 93/112 (83%), Positives = 100/112 (89%)
 Frame = -3

Query: 336 KAIAKLMAVREGEKVHGITVRNGYESLVFVQNTLVHVYAACGQAESAHKMFELMPERNLV 157
           +AIAKLM VREGEKVH I +RNG+ESLVFVQNTLVH+YAACG AESAHK+FELM ERNLV
Sbjct: 3   RAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLV 62

Query: 156 TWNSVINGFALNSRPNETLTLFREMVHEGVERDGFTMVSLLTVCAELGALAL 1
           TWNSVING+ALN RPNE LTLFREM   GVE DGFTMVSLL+ CAELGALAL
Sbjct: 63  TWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALAL 114



 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/128 (37%), Positives = 70/128 (54%)
 Frame = -3

Query: 396 FFRMQSFGVWPDNFTYPFLLKAIAKLMAVREGEKVHGITVRNGYESLVFVQNTLVHVYAA 217
           F  M   GV PD FT   LL A A+L A+  G + H   V+ G +  +   N L+ +YA 
Sbjct: 84  FREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAK 143

Query: 216 CGQAESAHKMFELMPERNLVTWNSVINGFALNSRPNETLTLFREMVHEGVERDGFTMVSL 37
           CG    AHK+F+ M E+++V+W S+I G A+N    E L LF+E+  +G+     T V +
Sbjct: 144 CGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGV 203

Query: 36  LTVCAELG 13
           L  C+  G
Sbjct: 204 LYACSHCG 211


>ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  186 bits (471), Expect = 2e-45
 Identities = 90/124 (72%), Positives = 105/124 (84%)
 Frame = -3

Query: 372 VWPDNFTYPFLLKAIAKLMAVREGEKVHGITVRNGYESLVFVQNTLVHVYAACGQAESAH 193
           V PD  TYPFLLKAI+K + VREGE +H +T+RNG+ESLVFVQN+L+H+YAACG  ESA+
Sbjct: 114 VEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAY 173

Query: 192 KMFELMPERNLVTWNSVINGFALNSRPNETLTLFREMVHEGVERDGFTMVSLLTVCAELG 13
           K+FELM ER+LV WNS+INGFALN RPNE LTLFREM  EGVE DGFT+VSLL+  AELG
Sbjct: 174 KVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELG 233

Query: 12  ALAL 1
           AL L
Sbjct: 234 ALEL 237



 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 51/130 (39%), Positives = 69/130 (53%)
 Frame = -3

Query: 396 FFRMQSFGVWPDNFTYPFLLKAIAKLMAVREGEKVHGITVRNGYESLVFVQNTLVHVYAA 217
           F  M   GV PD FT   LL A A+L A+  G +VH   ++ G      V N+L+ +YA 
Sbjct: 207 FREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAK 266

Query: 216 CGQAESAHKMFELMPERNLVTWNSVINGFALNSRPNETLTLFREMVHEGVERDGFTMVSL 37
           CG    A ++F  M ERN V+W S+I G A+N    E L LF+EM  +G+     T V +
Sbjct: 267 CGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGV 326

Query: 36  LTVCAELGAL 7
           L  C+  G L
Sbjct: 327 LYACSHCGML 336


>ref|XP_002531058.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529353|gb|EEF31319.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 341

 Score =  185 bits (469), Expect = 4e-45
 Identities = 86/132 (65%), Positives = 109/132 (82%)
 Frame = -3

Query: 396 FFRMQSFGVWPDNFTYPFLLKAIAKLMAVREGEKVHGITVRNGYESLVFVQNTLVHVYAA 217
           + R+    + PD  TYPFLLKA++K++ VR GEK+H I++RNG+ESLVFVQN+L+H+YAA
Sbjct: 128 YHRLHFNSIEPDTHTYPFLLKAVSKMVNVRVGEKIHSISIRNGFESLVFVQNSLMHMYAA 187

Query: 216 CGQAESAHKMFELMPERNLVTWNSVINGFALNSRPNETLTLFREMVHEGVERDGFTMVSL 37
           CGQ ESAHK+FE MP+R+LV WN+ I+GFALN +PNE L L+ EM  EGVE DGFT+VSL
Sbjct: 188 CGQYESAHKLFEFMPDRDLVAWNTAISGFALNGKPNEALKLYMEMGLEGVEPDGFTLVSL 247

Query: 36  LTVCAELGALAL 1
           L+ CAELGALAL
Sbjct: 248 LSACAELGALAL 259



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/110 (36%), Positives = 63/110 (57%)
 Frame = -3

Query: 396 FFRMQSFGVWPDNFTYPFLLKAIAKLMAVREGEKVHGITVRNGYESLVFVQNTLVHVYAA 217
           +  M   GV PD FT   LL A A+L A+  G ++H   V+ G +  +   N+L+ +YA 
Sbjct: 229 YMEMGLEGVEPDGFTLVSLLSACAELGALALGRRIHAYMVKVGLDENLHANNSLIDLYAK 288

Query: 216 CGQAESAHKMFELMPERNLVTWNSVINGFALNSRPNETLTLFREMVHEGV 67
           CG+   A ++F+ M  RN+V+W S+I G A+N    E +  F+EM  +G+
Sbjct: 289 CGRIRDAQQVFDEMELRNVVSWTSLIVGLAVNGFGMEAIEHFKEMEKQGL 338


>ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Glycine max]
          Length = 661

 Score =  176 bits (445), Expect = 2e-42
 Identities = 86/122 (70%), Positives = 101/122 (82%)
 Frame = -3

Query: 366 PDNFTYPFLLKAIAKLMAVREGEKVHGITVRNGYESLVFVQNTLVHVYAACGQAESAHKM 187
           PD  TYPFLLKAI+K + VREGE +H +T+RNG+ESLVFVQN+L+H+YAACG  ESAH +
Sbjct: 128 PDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAHNV 187

Query: 186 FELMPERNLVTWNSVINGFALNSRPNETLTLFREMVHEGVERDGFTMVSLLTVCAELGAL 7
           FELM +R+LV   SVINGFALN RP+E LTLFREM  EGVE DGFT+VSLL+  AELGAL
Sbjct: 188 FELMRDRDLVAXISVINGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGAL 247

Query: 6   AL 1
            L
Sbjct: 248 EL 249



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 48/130 (36%), Positives = 64/130 (49%)
 Frame = -3

Query: 396 FFRMQSFGVWPDNFTYPFLLKAIAKLMAVREGEKVHGITVRNGYESLVFVQNTLVHVYAA 217
           F  M + GV PD FT   LL A A+L A+  G +VH   ++ G      V N+L+ +YA 
Sbjct: 219 FREMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLRENSHVTNSLLDLYAK 278

Query: 216 CGQAESAHKMFELMPERNLVTWNSVINGFALNSRPNETLTLFREMVHEGVERDGFTMVSL 37
           C              ERN V+W S+I G A+N    E L LFREM  +G+     T V +
Sbjct: 279 CDAIWEX--------ERNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSEITFVGV 330

Query: 36  LTVCAELGAL 7
           L  C+  G L
Sbjct: 331 LYACSHCGML 340