BLASTX nr result

ID: Bupleurum21_contig00035969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035969
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524503.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_002285231.1| PREDICTED: uncharacterized protein LOC100255...    64   2e-08
ref|XP_002325224.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_003542676.1| PREDICTED: uncharacterized protein LOC100786...    60   1e-07
emb|CAN77909.1| hypothetical protein VITISV_000907 [Vitis vinifera]    60   1e-07

>ref|XP_002524503.1| conserved hypothetical protein [Ricinus communis]
           gi|223536291|gb|EEF37943.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 41/85 (48%), Positives = 50/85 (58%), Gaps = 17/85 (20%)
 Frame = +3

Query: 75  VALATAMALSGTVIVLALRLQK-LSGNHLP----------------RSCMISSDEKIRAX 203
           + LATAMA+SGTVI+LALRLQK L  + LP                RSC+ S  +K    
Sbjct: 10  MVLATAMAVSGTVILLALRLQKSLPPSLLPMEQQIPQSSHQQQAVLRSCISSEGKKTNKK 69

Query: 204 XXXXRVQFAEDVVDPTGNSEEFRKR 278
               RV FAEDVVDP G+ EEFR++
Sbjct: 70  KKKKRVHFAEDVVDPRGDGEEFRRQ 94


>ref|XP_002285231.1| PREDICTED: uncharacterized protein LOC100255957 [Vitis vinifera]
           gi|297738961|emb|CBI28206.3| unnamed protein product
           [Vitis vinifera]
          Length = 131

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 43/80 (53%), Positives = 50/80 (62%), Gaps = 12/80 (15%)
 Frame = +3

Query: 75  VALATAMALSGTVIVLALRLQKL--SGNHLPRSCMISSD----------EKIRAXXXXXR 218
           V LATAMA+SGTVI+LAL   K       LPRSC ISSD          EK +      R
Sbjct: 10  VVLATAMAVSGTVILLALCRPKAFTPPQQLPRSC-ISSDGKKKEKENEKEKEKKKKKKKR 68

Query: 219 VQFAEDVVDPTGNSEEFRKR 278
           V FAEDVVDP+G+SEEFR++
Sbjct: 69  VHFAEDVVDPSGDSEEFRRQ 88


>ref|XP_002325224.1| predicted protein [Populus trichocarpa] gi|222866658|gb|EEF03789.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 42/87 (48%), Positives = 49/87 (56%), Gaps = 19/87 (21%)
 Frame = +3

Query: 75  VALATAMALSGTVIVLALRLQKLSGNHLP-------------------RSCMISSDEKIR 197
           V LATAMA+SGTVIVLA RLQK   +HLP                   RSC+  S E  +
Sbjct: 10  VVLATAMAVSGTVIVLAFRLQK---SHLPSGQFPGDHHQIPQSSQQALRSCI--SPEGKK 64

Query: 198 AXXXXXRVQFAEDVVDPTGNSEEFRKR 278
                 RV FAEDVVDP G+ EEFR++
Sbjct: 65  KKGKKKRVHFAEDVVDPRGDGEEFRRQ 91


>ref|XP_003542676.1| PREDICTED: uncharacterized protein LOC100786698 [Glycine max]
          Length = 148

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 14/82 (17%)
 Frame = +3

Query: 75  VALATAMALSGTVIVLALRLQKL--------------SGNHLPRSCMISSDEKIRAXXXX 212
           VA+ATAMA+SGTVI+LALRLQK               S + + RSC+ ++ +K +     
Sbjct: 10  VAVATAMAVSGTVILLALRLQKSFPPPQFSVHHQIPPSPSPVLRSCISNAGKKSKKKKKK 69

Query: 213 XRVQFAEDVVDPTGNSEEFRKR 278
            RV FAEDVV+   + EEFRKR
Sbjct: 70  KRVHFAEDVVESCRDGEEFRKR 91


>emb|CAN77909.1| hypothetical protein VITISV_000907 [Vitis vinifera]
          Length = 132

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 42/81 (51%), Positives = 49/81 (60%), Gaps = 13/81 (16%)
 Frame = +3

Query: 75  VALATAMALSGTVIVLALRLQKL--SGNHLPRSCMISSDEKIRAXXXXX----------- 215
           V LATAMA+SGTVI+LAL   K       LPRSC ISSD K +                 
Sbjct: 10  VVLATAMAVSGTVILLALCRPKAFTPPQQLPRSC-ISSDGKKKEKENEKEKEKEKKKKKK 68

Query: 216 RVQFAEDVVDPTGNSEEFRKR 278
           RV FAEDVVDP+G+SEEFR++
Sbjct: 69  RVHFAEDVVDPSGDSEEFRRQ 89


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