BLASTX nr result

ID: Bupleurum21_contig00035957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035957
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc...   103   2e-20
ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago ...    97   1e-18
ref|XP_003590348.1| Zinc finger MYM-type 1 [Medicago truncatula]...    87   2e-15
gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ...    86   3e-15
ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerizat...    86   3e-15

>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 892

 Score =  103 bits (256), Expect = 2e-20
 Identities = 42/72 (58%), Positives = 59/72 (81%)
 Frame = +1

Query: 85  KSSRSEYVVLDLNNLPADPGRRLKITEYHPNDRDKVRRAYLQKGPCQPGEHNFKKRKIGN 264
           + S S++V  +L  LP+DPG+R K++ YHPND++ +RRAYLQKGPCQP +HNF +RKIGN
Sbjct: 127 QGSSSQHVSCNLEELPSDPGKRPKMSTYHPNDQEIIRRAYLQKGPCQPNQHNFPQRKIGN 186

Query: 265 SLRRFNPTWYED 300
           S+RRF P+W+ +
Sbjct: 187 SMRRFCPSWFNE 198


>ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago truncatula]
           gi|355478915|gb|AES60118.1| hypothetical protein
           MTR_1g040620 [Medicago truncatula]
          Length = 665

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 40/69 (57%), Positives = 54/69 (78%)
 Frame = +1

Query: 88  SSRSEYVVLDLNNLPADPGRRLKITEYHPNDRDKVRRAYLQKGPCQPGEHNFKKRKIGNS 267
           S ++ ++ +DL NLPA+PG R +++ YHPNDRD++RRAYL KGPCQP EHNF +R  G  
Sbjct: 31  SFKNGFLEVDLENLPANPGERKQLSCYHPNDRDEIRRAYLAKGPCQPKEHNFPQRPFGTF 90

Query: 268 LRRFNPTWY 294
           LR+FNP W+
Sbjct: 91  LRKFNPDWF 99


>ref|XP_003590348.1| Zinc finger MYM-type 1 [Medicago truncatula]
           gi|355479396|gb|AES60599.1| Zinc finger MYM-type 1
           [Medicago truncatula]
          Length = 368

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/91 (45%), Positives = 56/91 (61%)
 Frame = +1

Query: 31  PIEPTIDQTRGNQNTKVVKSSRSEYVVLDLNNLPADPGRRLKITEYHPNDRDKVRRAYLQ 210
           P   T+D+    Q    +K     ++ LDL  LP+DPG R ++ +YHP+DR+K+RR Y Q
Sbjct: 19  PNSQTLDECESIQLGPPLKK---RWLELDLGKLPSDPGLRPRLLDYHPSDREKIRRYYFQ 75

Query: 211 KGPCQPGEHNFKKRKIGNSLRRFNPTWYEDH 303
           KGPCQP E NF   K G+S R+FN  WY  +
Sbjct: 76  KGPCQPREINFPLAKFGDSSRKFNLEWYSKY 106


>gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for
           transposase from Ipomoea purpurea gb|4063769 and is a
           member of the transmembrane 4 family PF|00335
           [Arabidopsis thaliana]
          Length = 811

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 36/62 (58%), Positives = 45/62 (72%)
 Frame = +1

Query: 112 LDLNNLPADPGRRLKITEYHPNDRDKVRRAYLQKGPCQPGEHNFKKRKIGNSLRRFNPTW 291
           ++LN LP+DP +R  I  YHPN RD+VRR YL +GPCQP  H FK+  IG  LRRFNP W
Sbjct: 57  INLNELPSDPAKRKSILSYHPNQRDEVRREYLIRGPCQPRGHKFKQIAIGKVLRRFNPKW 116

Query: 292 YE 297
           ++
Sbjct: 117 FD 118


>ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerization domain
           [Arabidopsis thaliana] gi|332191703|gb|AEE29824.1|
           TTF-type zinc finger protein with HAT dimerization
           domain [Arabidopsis thaliana]
          Length = 769

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 36/62 (58%), Positives = 45/62 (72%)
 Frame = +1

Query: 112 LDLNNLPADPGRRLKITEYHPNDRDKVRRAYLQKGPCQPGEHNFKKRKIGNSLRRFNPTW 291
           ++LN LP+DP +R  I  YHPN RD+VRR YL +GPCQP  H FK+  IG  LRRFNP W
Sbjct: 15  INLNELPSDPAKRKSILSYHPNQRDEVRREYLIRGPCQPRGHKFKQIAIGKVLRRFNPKW 74

Query: 292 YE 297
           ++
Sbjct: 75  FD 76


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