BLASTX nr result

ID: Bupleurum21_contig00035950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035950
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]   126   2e-27
ref|XP_003549145.1| PREDICTED: zinc finger BED domain-containing...   120   1e-25
ref|XP_003541477.1| PREDICTED: uncharacterized protein LOC100800...   119   3e-25
ref|XP_003550816.1| PREDICTED: uncharacterized protein LOC100783...   117   7e-25
ref|XP_002875576.1| hypothetical protein ARALYDRAFT_323059 [Arab...   117   1e-24

>emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]
          Length = 1045

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/107 (53%), Positives = 80/107 (74%), Gaps = 1/107 (0%)
 Frame = -1

Query: 320 DTSSQSIAKMVIMHDYPLNIVEHKGFFEFVRILHPQVS-IDVNSIQEECINIYMKQKQDV 144
           D  +Q IAKM+IMH+YPL+IVEH GF  FV  L PQ + +  NSIQ +C+ +++++KQ++
Sbjct: 481 DRCNQEIAKMIIMHEYPLHIVEHSGFINFVHTLQPQFNMVSFNSIQGDCVALFLREKQNL 540

Query: 143 IKTLGGILGHVNLTLDLWNSDQGLCYLLLTGYFVDSFWKLQKRILNV 3
             TL GI G V+LTLD+W SD+ L Y+ LTG+F+D  WKL ++ILNV
Sbjct: 541 SNTLNGIPGRVSLTLDMWTSDENLGYVFLTGHFIDGEWKLHRQILNV 587


>ref|XP_003549145.1| PREDICTED: zinc finger BED domain-containing protein 1-like
           [Glycine max]
          Length = 1038

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/121 (47%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
 Frame = -1

Query: 362 RHSSVPRPSIRIH*DTSSQSIAKMVIMHDYPLNIVEHKGFFEFVRILHPQVSIDV-NSIQ 186
           ++ S   P +    D     IA+M+IMHDYPL++VEH GF  FV+ L PQ  ++  NSIQ
Sbjct: 494 QYRSPSMPYVIFDQDQCRNEIARMIIMHDYPLHMVEHSGFVAFVQNLQPQFKMETFNSIQ 553

Query: 185 EECINIYMKQKQDVIKTLGGILGHVNLTLDLWNSDQGLCYLLLTGYFVDSFWKLQKRILN 6
            +C+  Y+ +KQ ++K + G+ G V LTLD+W S Q L Y+ +TG+FVD  WKLQ+RILN
Sbjct: 554 GDCVATYLMEKQHLLKCIDGLPGRVCLTLDIWTSSQSLGYVFITGHFVDHDWKLQRRILN 613

Query: 5   V 3
           V
Sbjct: 614 V 614


>ref|XP_003541477.1| PREDICTED: uncharacterized protein LOC100800468 [Glycine max]
          Length = 1100

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/121 (49%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
 Frame = -1

Query: 362 RHSSVPRPSIRIH*DTSSQSIAKMVIMHDYPLNIVEHKGFFEFVRILHPQVS-IDVNSIQ 186
           R+ S   P I    D     IA+M+IMHDYPL++VEH GF  FV+ L PQ + +  N+IQ
Sbjct: 541 RYRSPNTPYIIFDQDRCRHEIARMIIMHDYPLHMVEHPGFVAFVQNLQPQFNMVTFNTIQ 600

Query: 185 EECINIYMKQKQDVIKTLGGILGHVNLTLDLWNSDQGLCYLLLTGYFVDSFWKLQKRILN 6
            +C+  Y+ +KQ V+K   G+ G V LTLD+W S Q + Y+ +TG+FVDS WKLQ+RILN
Sbjct: 601 GDCVATYLMEKQCVMKYFDGLPGRVCLTLDVWTSSQSVGYVFITGHFVDSDWKLQRRILN 660

Query: 5   V 3
           V
Sbjct: 661 V 661


>ref|XP_003550816.1| PREDICTED: uncharacterized protein LOC100783258 [Glycine max]
          Length = 1154

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/121 (48%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
 Frame = -1

Query: 362 RHSSVPRPSIRIH*DTSSQSIAKMVIMHDYPLNIVEHKGFFEFVRILHPQVS-IDVNSIQ 186
           R+ S   P I    D     IA+M+IMHDYPL++VEH GF  FV+ L P+ + +  N+IQ
Sbjct: 595 RYRSPNTPYIIFDQDRCRHEIARMIIMHDYPLHMVEHPGFVAFVQNLQPRFNMVTFNTIQ 654

Query: 185 EECINIYMKQKQDVIKTLGGILGHVNLTLDLWNSDQGLCYLLLTGYFVDSFWKLQKRILN 6
            +C+  Y+ +KQ V+K   G+ G V LTLD+W S Q + Y+ +TG+FVDS WKLQ+RILN
Sbjct: 655 GDCVATYLMEKQCVMKYFDGLPGRVCLTLDVWTSSQSVGYVFITGHFVDSDWKLQRRILN 714

Query: 5   V 3
           V
Sbjct: 715 V 715


>ref|XP_002875576.1| hypothetical protein ARALYDRAFT_323059 [Arabidopsis lyrata subsp.
           lyrata] gi|297321414|gb|EFH51835.1| hypothetical protein
           ARALYDRAFT_323059 [Arabidopsis lyrata subsp. lyrata]
          Length = 654

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/119 (44%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
 Frame = -1

Query: 356 SSVPRPSIRIH*DTSSQSIAKMVIMHDYPLNIVEHKGFFEFVRILHPQV-SIDVNSIQEE 180
           +  P P +  + D   Q IAKM+IMHDYPL++V+H GF  FV+ + P   ++  N++Q +
Sbjct: 110 TQTPSPFVAFNQDKCRQEIAKMIIMHDYPLHMVQHPGFISFVQSIQPHFDAVSFNNVQGD 169

Query: 179 CINIYMKQKQDVIKTLGGILGHVNLTLDLWNSDQGLCYLLLTGYFVDSFWKLQKRILNV 3
           C+  Y+ +KQ+V+K+L GI G   LTLD W S   L Y+ +T +F+DS WK+QK++LNV
Sbjct: 170 CVATYLAEKQNVMKSLEGIPGRFCLTLDFWTSKLTLGYVFITAHFIDSDWKIQKKLLNV 228


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