BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035929
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   155   2e-36
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [...   146   2e-33
emb|CBI31781.3| unnamed protein product [Vitis vinifera]              143   1e-32
ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-...   140   1e-31
ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-...   140   1e-31

>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  155 bits (393), Expect = 2e-36
 Identities = 82/129 (63%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
 Frame = +3

Query: 3   KLQHVLSSVLTFLGRSPDIQRGITRIYHRTATASEFIATVQAILVTGRQLQELHVEEEGY 182
           ++ ++LSSVLT LGRSPDIQRG+TRI+HRTATASEFI+  QAIL  G+QLQ LH+EE+  
Sbjct: 521 EVNYLLSSVLTTLGRSPDIQRGLTRIFHRTATASEFISVTQAILFAGKQLQRLHIEEKDV 580

Query: 183 TNL-RKNIVHSVLLKKLVLTASSSSVIGIVAKLLSVLNKDAAEKQDLPNIFISTDGQFSE 359
               +   V SVLL+KL+LTASSS +IG  AKLLS LNK+AA+K DLPN+FI + GQF E
Sbjct: 581 DEKGQSRSVRSVLLRKLILTASSSGIIGNAAKLLSTLNKEAADKGDLPNLFIISSGQFPE 640

Query: 360 VCEARTKVQ 386
           V +AR+ VQ
Sbjct: 641 VAKARSLVQ 649


>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
           gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
           MSH3, putative [Ricinus communis]
          Length = 1100

 Score =  146 bits (368), Expect = 2e-33
 Identities = 77/125 (61%), Positives = 95/125 (76%), Gaps = 1/125 (0%)
 Frame = +3

Query: 12  HVLSSVLTFLGRSPDIQRGITRIYHRTATASEFIATVQAILVTGRQLQELHVEEE-GYTN 188
           H+LS+VL  LGRSPDIQRGITRI+HRTATASEFIA +QAIL+ G+QL+ L +EEE     
Sbjct: 515 HLLSTVLEMLGRSPDIQRGITRIFHRTATASEFIAVIQAILIAGKQLRRLQIEEEQNNKR 574

Query: 189 LRKNIVHSVLLKKLVLTASSSSVIGIVAKLLSVLNKDAAEKQDLPNIFISTDGQFSEVCE 368
           ++   V SVLLKKL+LT SSSSV+G  AKLLS LNK+AAE  DL N+ + ++GQF EV  
Sbjct: 575 VQAKTVRSVLLKKLILTVSSSSVVGHAAKLLSTLNKEAAEHGDLTNLIVISNGQFPEVAS 634

Query: 369 ARTKV 383
           +   V
Sbjct: 635 SNKAV 639


>emb|CBI31781.3| unnamed protein product [Vitis vinifera]
          Length = 903

 Score =  143 bits (361), Expect = 1e-32
 Identities = 75/116 (64%), Positives = 91/116 (78%), Gaps = 1/116 (0%)
 Frame = +3

Query: 42  GRSPDIQRGITRIYHRTATASEFIATVQAILVTGRQLQELHVEEEGYTNL-RKNIVHSVL 218
           GRSPDIQRG+TRI+HRTATASEFI+  QAIL  G+QLQ LH+EE+      +   V SVL
Sbjct: 394 GRSPDIQRGLTRIFHRTATASEFISVTQAILFAGKQLQRLHIEEKDVDEKGQSRSVRSVL 453

Query: 219 LKKLVLTASSSSVIGIVAKLLSVLNKDAAEKQDLPNIFISTDGQFSEVCEARTKVQ 386
           L+KL+LTASSS +IG  AKLLS LNK+AA+K DLPN+FI + GQF EV +AR+ VQ
Sbjct: 454 LRKLILTASSSGIIGNAAKLLSTLNKEAADKGDLPNLFIISSGQFPEVAKARSLVQ 509


>ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
          Length = 966

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/128 (55%), Positives = 96/128 (75%)
 Frame = +3

Query: 3   KLQHVLSSVLTFLGRSPDIQRGITRIYHRTATASEFIATVQAILVTGRQLQELHVEEEGY 182
           +L ++LSSVLT LGR+PDIQRGITRI+HRTA  SEFIA +QAIL  G+QLQ+ H++EE  
Sbjct: 539 ELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILFAGKQLQQFHIDEEDD 598

Query: 183 TNLRKNIVHSVLLKKLVLTASSSSVIGIVAKLLSVLNKDAAEKQDLPNIFISTDGQFSEV 362
               ++I+ S LL+KL+L+ASSS +I I AKLLS ++K+AA++ D PN+ I    QF +V
Sbjct: 599 NCSSESIIGSKLLRKLILSASSSGLINIAAKLLSTISKEAADQGDFPNLMIIYSDQFPKV 658

Query: 363 CEARTKVQ 386
             AR + Q
Sbjct: 659 ARARKEAQ 666


>ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
          Length = 1094

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/128 (55%), Positives = 96/128 (75%)
 Frame = +3

Query: 3   KLQHVLSSVLTFLGRSPDIQRGITRIYHRTATASEFIATVQAILVTGRQLQELHVEEEGY 182
           +L ++LSSVLT LGR+PDIQRGITRI+HRTA  SEFIA +QAIL  G+QLQ+ H++EE  
Sbjct: 522 ELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILFAGKQLQQFHIDEEDD 581

Query: 183 TNLRKNIVHSVLLKKLVLTASSSSVIGIVAKLLSVLNKDAAEKQDLPNIFISTDGQFSEV 362
               ++I+ S LL+KL+L+ASSS +I I AKLLS ++K+AA++ D PN+ I    QF +V
Sbjct: 582 NCSSESIIGSKLLRKLILSASSSGLINIAAKLLSTISKEAADQGDFPNLMIIYSDQFPKV 641

Query: 363 CEARTKVQ 386
             AR + Q
Sbjct: 642 ARARKEAQ 649