BLASTX nr result

ID: Bupleurum21_contig00035921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035921
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I an...   157   8e-37
gb|AFK36810.1| unknown [Lotus japonicus]                              156   1e-36
ref|XP_003621619.1| DNA-directed RNA polymerases I and III subun...   150   1e-34
gb|AFK35687.1| unknown [Medicago truncatula]                          149   2e-34
gb|ABW81101.1| RNApol24 [Cleome spinosa]                              149   2e-34

>ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2
           isoform 1 [Vitis vinifera] gi|297745971|emb|CBI16027.3|
           unnamed protein product [Vitis vinifera]
          Length = 105

 Score =  157 bits (397), Expect = 8e-37
 Identities = 75/105 (71%), Positives = 89/105 (84%)
 Frame = -1

Query: 437 MEQGSIENPSASTFSLTDEDHTLANSLRFVLNQDARVTFSGYSVPHPSEARVNVRIQTTG 258
           ME GS  + S STFSL+DEDHTLANS+RF LNQD RV F GYS+PHPS+ARVN+R+QTTG
Sbjct: 1   MEHGSFSDHSKSTFSLSDEDHTLANSIRFTLNQDPRVAFCGYSIPHPSDARVNIRVQTTG 60

Query: 257 DPASEVLKDSCQNLMLMGQHVRSTFDQAVLDFKNRKGLKEMDIEK 123
           D A EVLKD+CQ+LMLM QHVRSTFD+AV+D+K  K +K+M IEK
Sbjct: 61  DSAREVLKDACQDLMLMCQHVRSTFDKAVVDYKMSKPVKDMSIEK 105


>gb|AFK36810.1| unknown [Lotus japonicus]
          Length = 104

 Score =  156 bits (395), Expect = 1e-36
 Identities = 73/104 (70%), Positives = 89/104 (85%)
 Frame = -1

Query: 437 MEQGSIENPSASTFSLTDEDHTLANSLRFVLNQDARVTFSGYSVPHPSEARVNVRIQTTG 258
           ME GS  + S STFSLTDEDHT AN++R+ LNQD RVTF GYS+PHPS+ RVN+R+QTTG
Sbjct: 1   MEHGSHSDESRSTFSLTDEDHTFANAIRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 60

Query: 257 DPASEVLKDSCQNLMLMGQHVRSTFDQAVLDFKNRKGLKEMDIE 126
           +PA EVLKDSCQ++MLM QHVR TFD+AV DFK++KG K+MDI+
Sbjct: 61  EPAREVLKDSCQHMMLMCQHVRGTFDKAVNDFKSKKGGKDMDID 104


>ref|XP_003621619.1| DNA-directed RNA polymerases I and III subunit RPAC2 [Medicago
           truncatula] gi|355496634|gb|AES77837.1| DNA-directed RNA
           polymerases I and III subunit RPAC2 [Medicago
           truncatula]
          Length = 115

 Score =  150 bits (379), Expect = 1e-34
 Identities = 73/99 (73%), Positives = 82/99 (82%)
 Frame = -1

Query: 437 MEQGSIENPSASTFSLTDEDHTLANSLRFVLNQDARVTFSGYSVPHPSEARVNVRIQTTG 258
           ME GS  + S STFSL DEDHT ANS+RF+LNQD RVTF GYS+PHPSE RVNVR+QTTG
Sbjct: 1   MEHGSYSDLSKSTFSLVDEDHTFANSVRFILNQDPRVTFCGYSIPHPSENRVNVRVQTTG 60

Query: 257 DPASEVLKDSCQNLMLMGQHVRSTFDQAVLDFKNRKGLK 141
           DPASEVLKD CQ+LMLM QHVRSTF +AV DFK  K ++
Sbjct: 61  DPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKTSKSVR 99


>gb|AFK35687.1| unknown [Medicago truncatula]
          Length = 115

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/99 (73%), Positives = 81/99 (81%)
 Frame = -1

Query: 437 MEQGSIENPSASTFSLTDEDHTLANSLRFVLNQDARVTFSGYSVPHPSEARVNVRIQTTG 258
           ME GS  + S STFSL DEDHT ANS+RF LNQD RVTF GYS+PHPSE RVNVR+QTTG
Sbjct: 1   MEHGSYSDLSKSTFSLVDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 60

Query: 257 DPASEVLKDSCQNLMLMGQHVRSTFDQAVLDFKNRKGLK 141
           DPASEVLKD CQ+LMLM QHVRSTF +AV DFK  K ++
Sbjct: 61  DPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKTSKSVR 99


>gb|ABW81101.1| RNApol24 [Cleome spinosa]
          Length = 109

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/103 (67%), Positives = 83/103 (80%)
 Frame = -1

Query: 437 MEQGSIENPSASTFSLTDEDHTLANSLRFVLNQDARVTFSGYSVPHPSEARVNVRIQTTG 258
           ME GS  + S +TFSLT+EDHTLAN++RFVLNQD RVTF GYS+PHPS ARVN+R+QTTG
Sbjct: 1   MEHGSFTDHSHATFSLTEEDHTLANAVRFVLNQDPRVTFCGYSIPHPSHARVNIRVQTTG 60

Query: 257 DPASEVLKDSCQNLMLMGQHVRSTFDQAVLDFKNRKGLKEMDI 129
           DPA EVLKD+CQ+LMLM +HVR  FD AV DFK     + MD+
Sbjct: 61  DPAREVLKDACQDLMLMNRHVRGVFDNAVADFKKGNQTESMDV 103


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