BLASTX nr result

ID: Bupleurum21_contig00035912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035912
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD48963.1|AF147263_5 contains similarity to transposases [Ar...    83   3e-16
dbj|BAB01989.1| unnamed protein product [Arabidopsis thaliana]         84   1e-15
gb|AAD43146.1|AC007504_1 Hypothetical Protein [Arabidopsis thali...    89   1e-15
gb|AAF79835.1|AC026875_15 T6D22.19 [Arabidopsis thaliana]              82   3e-15
gb|AAF79807.1|AC020646_30 T32E20.12 [Arabidopsis thaliana]             87   7e-15

>gb|AAD48963.1|AF147263_5 contains similarity to transposases [Arabidopsis thaliana]
           gi|7267311|emb|CAB81093.1| AT4g05510 [Arabidopsis
           thaliana]
          Length = 604

 Score = 82.8 bits (203), Expect(2) = 3e-16
 Identities = 36/69 (52%), Positives = 53/69 (76%)
 Frame = +3

Query: 261 NESKYGELSYMARDILSVPLTTVASESTFSIGGRILNKWRSSYLPENIEVLITARSWLHG 440
           N  ++G L+YMA D+LS+P+T+VASES+FSIG  +LNK+RS  LP N++ L+  RSWL+G
Sbjct: 525 NRLRFGALAYMAMDVLSIPITSVASESSFSIGSHVLNKYRSRLLPTNVQALLCTRSWLYG 584

Query: 441 YEAMDEECI 467
           + + +E  I
Sbjct: 585 FVSDEEGMI 593



 Score = 28.9 bits (63), Expect(2) = 3e-16
 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = +1

Query: 148 DTQDSSEVAINNK-LDLYLKEPRLD--RNTDLNILEFW 252
           D  D  EV      LD+YL++P+L+   + +LN+L++W
Sbjct: 485 DLDDVPEVEEGKSALDMYLEDPKLEMKNHPNLNVLQYW 522


>dbj|BAB01989.1| unnamed protein product [Arabidopsis thaliana]
          Length = 191

 Score = 83.6 bits (205), Expect(2) = 1e-15
 Identities = 39/77 (50%), Positives = 55/77 (71%)
 Frame = +3

Query: 261 NESKYGELSYMARDILSVPLTTVASESTFSIGGRILNKWRSSYLPENIEVLITARSWLHG 440
           N S++ ELS MA DILS+P+TTVASES FSIG R+LNK+RS  LP N++ L+  R+W  G
Sbjct: 112 NVSRFKELSSMACDILSIPITTVASESAFSIGSRVLNKYRSCLLPTNVQALLCTRNWFRG 171

Query: 441 YEAMDEECIGSEVDWTT 491
           ++ ++ + I  + D  T
Sbjct: 172 FQEVETDEIQGQEDTNT 188



 Score = 26.2 bits (56), Expect(2) = 1e-15
 Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +1

Query: 187 LDLYLKEPRLDRNT--DLNILEFWGGEMNQNME 279
           LD+YL+EP LD  +  D++++ +W   +++  E
Sbjct: 86  LDMYLEEPVLDMVSFRDMDVIAYWKNNVSRFKE 118


>gb|AAD43146.1|AC007504_1 Hypothetical Protein [Arabidopsis thaliana]
          Length = 258

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
 Frame = +3

Query: 153 SRFIGSCNKQQVGSLLKRA*T*SKYRFKHFGVLG--GGNESKYGELSYMARDILSVPLTT 326
           S+ +GS  K ++   L    T     F+HF VL     N  ++ ELS MA D+LS+P+TT
Sbjct: 137 SQKVGSSGKSELDIYLGEP-TLDMAAFRHFNVLAYWKDNSCRFKELSSMACDVLSIPITT 195

Query: 327 VASESTFSIGGRILNKWRSSYLPENIEVLITARSWLHGYEAMDEE 461
           VASES+FSIG  +L+K+RSS LPENI+ LI  R+WL G+    EE
Sbjct: 196 VASESSFSIGSGVLSKYRSSLLPENIQALICTRNWLRGFPKEGEE 240


>gb|AAF79835.1|AC026875_15 T6D22.19 [Arabidopsis thaliana]
          Length = 745

 Score = 82.0 bits (201), Expect(2) = 3e-15
 Identities = 39/77 (50%), Positives = 55/77 (71%)
 Frame = +3

Query: 261 NESKYGELSYMARDILSVPLTTVASESTFSIGGRILNKWRSSYLPENIEVLITARSWLHG 440
           N S++ ELS MA DILS+ +TTVASESTFSIG R+LNK+RS  LP N++ L+  R+W  G
Sbjct: 666 NVSRFKELSSMACDILSISITTVASESTFSIGSRVLNKYRSCLLPTNVQALLCTRNWFRG 725

Query: 441 YEAMDEECIGSEVDWTT 491
           ++ ++ + I  + D  T
Sbjct: 726 FQDVETDEIQGQEDTNT 742



 Score = 26.2 bits (56), Expect(2) = 3e-15
 Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +1

Query: 187 LDLYLKEPRLDRNT--DLNILEFWGGEMNQNME 279
           LD+YL+EP LD  +  D++++ +W   +++  E
Sbjct: 640 LDMYLEEPVLDMVSFRDMDVIAYWKNNVSRFKE 672


>gb|AAF79807.1|AC020646_30 T32E20.12 [Arabidopsis thaliana]
          Length = 206

 Score = 86.7 bits (213), Expect = 7e-15
 Identities = 41/72 (56%), Positives = 56/72 (77%)
 Frame = +3

Query: 246 VLGGGNESKYGELSYMARDILSVPLTTVASESTFSIGGRILNKWRSSYLPENIEVLITAR 425
           V+  G   ++G LSYMA D+LS+P+TTVASES+FSIG R+LNK+RS  LP++++ L+  R
Sbjct: 102 VMDEGKSHRFGALSYMAYDVLSIPITTVASESSFSIGSRVLNKYRSRLLPKHVQALLCTR 161

Query: 426 SWLHGYEAMDEE 461
           SWL GY A DE+
Sbjct: 162 SWLFGY-ADDEK 172


Top