BLASTX nr result

ID: Bupleurum21_contig00035910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035910
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265242.1| PREDICTED: uncharacterized protein LOC100258...    88   8e-16
emb|CAN78181.1| hypothetical protein VITISV_013634 [Vitis vinifera]    88   8e-16
ref|XP_002323183.1| f-box family protein [Populus trichocarpa] g...    87   1e-15
ref|XP_003634621.1| PREDICTED: uncharacterized protein LOC100854...    86   3e-15
emb|CAN63731.1| hypothetical protein VITISV_019890 [Vitis vinifera]    86   3e-15

>ref|XP_002265242.1| PREDICTED: uncharacterized protein LOC100258440 [Vitis vinifera]
          Length = 446

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 37/93 (39%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
 Frame = +3

Query: 69  EEHKMEERKWEDMNTDCLANIFGRLDLESRVLDVPFVCKGWHRALANPLCWKSLHIPDDV 248
           ++++ME RKWE++N DCL N+F ++ +ES +LDVP VCK WH+A  +P CW+ L  P+ +
Sbjct: 160 DDNQMEGRKWEELNRDCLVNVFQKVGMESMLLDVPLVCKSWHKASLDPKCWEFLIFPEYI 219

Query: 249 DFEKRW--GTISGLRYRDYPNYISGLIKFVVDR 341
           + +  W  G  +     ++   ++  IKFV+DR
Sbjct: 220 EPDDIWGRGPFAERFMLEFQFSVTAFIKFVIDR 252


>emb|CAN78181.1| hypothetical protein VITISV_013634 [Vitis vinifera]
          Length = 716

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 37/93 (39%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
 Frame = +3

Query: 69  EEHKMEERKWEDMNTDCLANIFGRLDLESRVLDVPFVCKGWHRALANPLCWKSLHIPDDV 248
           ++++ME RKWE++N DCL N+F ++ +ES +LDVP VCK WH+A  +P CW+ L  P+ +
Sbjct: 457 DDNQMEGRKWEELNRDCLVNVFQKVGMESMLLDVPLVCKSWHKASLDPKCWEFLIFPEYI 516

Query: 249 DFEKRW--GTISGLRYRDYPNYISGLIKFVVDR 341
           + +  W  G  +     ++   ++  IKFV+DR
Sbjct: 517 EPDDIWGRGPFAERFMLEFQFSVTAFIKFVIDR 549



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 22/53 (41%), Positives = 33/53 (62%)
 Frame = +3

Query: 93  KWEDMNTDCLANIFGRLDLESRVLDVPFVCKGWHRALANPLCWKSLHIPDDVD 251
           KWE+++ DCL  +  +  L+S V   P+VCK WH A  +P CW+ L  P+ +D
Sbjct: 72  KWEELDRDCLVIVLQKEGLKSLVSSAPYVCKTWHEASLDPKCWEDLAFPEHID 124


>ref|XP_002323183.1| f-box family protein [Populus trichocarpa]
           gi|222867813|gb|EEF04944.1| f-box family protein
           [Populus trichocarpa]
          Length = 314

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
 Frame = +3

Query: 78  KMEERKWEDMNTDCLANIFGRLDLESRVLDVPFVCKGWHRALANPLCWKSLHIPDDVDFE 257
           +MEERKWED+   CL N+ GR+ +ES +LDVPFVCK W++A  +P CWK L  P D+D E
Sbjct: 38  EMEERKWEDLECHCLVNVLGRVGMESLLLDVPFVCKSWYKASLDPSCWKHLVFPKDLDSE 97

Query: 258 KRWGTISGL--RYRDYPNYISGLIKFVVDR 341
           + +  +     +Y+     +    KFVV R
Sbjct: 98  RDFTLLDRFKEKYKIENCSVDAFTKFVVGR 127


>ref|XP_003634621.1| PREDICTED: uncharacterized protein LOC100854143 [Vitis vinifera]
          Length = 462

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
 Frame = +3

Query: 69  EEHKMEERKWEDMNTDCLANIFGRLDLESRVLDVPFVCKGWHRALANPLCWKSLHIPDDV 248
           ++ +M  RKWED+N DCL N+F ++ +ES +LDVP VCK WH+A  +P CW+SL  P+D+
Sbjct: 188 DDKEMGGRKWEDLNMDCLVNVFHKVGIESLLLDVPRVCKSWHKASLDPKCWESLIFPEDI 247

Query: 249 DFEKRW--GTISGLRYRDYPNYIS--GLIKFVVDR 341
              K W  G  S     +Y    S    IKFV+DR
Sbjct: 248 RC-KIWDNGRFSKRLMMEYQENFSSTAFIKFVIDR 281


>emb|CAN63731.1| hypothetical protein VITISV_019890 [Vitis vinifera]
          Length = 462

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
 Frame = +3

Query: 69  EEHKMEERKWEDMNTDCLANIFGRLDLESRVLDVPFVCKGWHRALANPLCWKSLHIPDDV 248
           ++ +M  RKWED+N DCL N+F ++ +ES +LDVP VCK WH+A  +P CW+SL  P+D+
Sbjct: 188 DDKEMGGRKWEDLNMDCLVNVFHKVGIESLLLDVPRVCKSWHKASLDPKCWESLIFPEDI 247

Query: 249 DFEKRW--GTISGLRYRDYPNYIS--GLIKFVVDR 341
              K W  G  S     +Y    S    IKFV+DR
Sbjct: 248 RC-KIWDNGRFSKRLMMEYQENFSSTAFIKFVIDR 281


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