BLASTX nr result

ID: Bupleurum21_contig00035863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035863
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521595.1| conserved hypothetical protein [Ricinus comm...   178   5e-43
ref|XP_002327802.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_002267514.1| PREDICTED: vam6/Vps39-like protein [Vitis vi...   158   4e-37
emb|CAN61039.1| hypothetical protein VITISV_018673 [Vitis vinifera]   158   5e-37
ref|NP_195381.6| Vacuolar sorting protein 39 [Arabidopsis thalia...   157   8e-37

>ref|XP_002521595.1| conserved hypothetical protein [Ricinus communis]
           gi|223539273|gb|EEF40866.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 972

 Score =  178 bits (451), Expect = 5e-43
 Identities = 86/128 (67%), Positives = 106/128 (82%)
 Frame = +1

Query: 88  KIDAVASSGRNLLVSCSDGCLHIYCPQSSASVPSDDLSETLELRKEAYVLQRTINGFSKK 267
           KIDA+ S G  LLV CSDG L IY P+SS S  SD L ++ ELR+E Y+L+RT+ GFSKK
Sbjct: 18  KIDAIESYGSKLLVGCSDGSLRIYGPESSVSERSDYLGQSQELRRECYLLERTVTGFSKK 77

Query: 268 PMFAMEVLVSRQFLIALSEAIAIYRLPNLEIVAVITKAKGANVFSWDDKRGFLCFARQRK 447
            + +MEVL SR+ L++LSE+IA +RLPNLE +AVITKAKGANV+SWDD+RGFLCFARQ++
Sbjct: 78  GLLSMEVLASRELLLSLSESIAFHRLPNLETLAVITKAKGANVYSWDDRRGFLCFARQKR 137

Query: 448 VSIFRHDG 471
           VSIFRHDG
Sbjct: 138 VSIFRHDG 145


>ref|XP_002327802.1| predicted protein [Populus trichocarpa] gi|222836887|gb|EEE75280.1|
           predicted protein [Populus trichocarpa]
          Length = 1008

 Score =  172 bits (436), Expect = 3e-41
 Identities = 85/131 (64%), Positives = 104/131 (79%), Gaps = 3/131 (2%)
 Frame = +1

Query: 88  KIDAVASSGRNLLVSCSDGCLHIYCPQSSAS---VPSDDLSETLELRKEAYVLQRTINGF 258
           KIDA+ S G  LL++CSDG L IY P S+ S    PSD  +   +LRKE Y L+RT+NGF
Sbjct: 18  KIDAIESYGSKLLIACSDGALRIYAPVSAISDKSPPSDYHNHGDQLRKEPYSLERTVNGF 77

Query: 259 SKKPMFAMEVLVSRQFLIALSEAIAIYRLPNLEIVAVITKAKGANVFSWDDKRGFLCFAR 438
           SKKPM +M+VL SR+ L++LSE+IA +RLPNLE +AV+TKAKGANVF WDDKRGFLCFAR
Sbjct: 78  SKKPMLSMKVLASRELLLSLSESIAFHRLPNLETIAVLTKAKGANVFDWDDKRGFLCFAR 137

Query: 439 QRKVSIFRHDG 471
           Q++V IFRHDG
Sbjct: 138 QKRVCIFRHDG 148


>ref|XP_002267514.1| PREDICTED: vam6/Vps39-like protein [Vitis vinifera]
          Length = 1006

 Score =  158 bits (400), Expect = 4e-37
 Identities = 81/131 (61%), Positives = 100/131 (76%), Gaps = 3/131 (2%)
 Frame = +1

Query: 88  KIDAVASSGRNLLVSCSDGCLHIYCPQSSA---SVPSDDLSETLELRKEAYVLQRTINGF 258
           +I+ + S G  L + CSDG L IY P+S +   S PSD     LELRKE YVL+RT+ GF
Sbjct: 18  RIETIESYGAKLFLGCSDGSLRIYGPESFSFDRSPPSDP--NALELRKEPYVLERTVTGF 75

Query: 259 SKKPMFAMEVLVSRQFLIALSEAIAIYRLPNLEIVAVITKAKGANVFSWDDKRGFLCFAR 438
           SKKP+ AMEV  +R  L++LSE+IA +RLPNLE +AVITKAKGANV+SWDD+RGFL FAR
Sbjct: 76  SKKPLVAMEVSGTRDLLLSLSESIAFHRLPNLETIAVITKAKGANVYSWDDRRGFLSFAR 135

Query: 439 QRKVSIFRHDG 471
           Q++V IFRHDG
Sbjct: 136 QKRVCIFRHDG 146


>emb|CAN61039.1| hypothetical protein VITISV_018673 [Vitis vinifera]
          Length = 1941

 Score =  158 bits (399), Expect = 5e-37
 Identities = 81/131 (61%), Positives = 100/131 (76%), Gaps = 3/131 (2%)
 Frame = +1

Query: 88  KIDAVASSGRNLLVSCSDGCLHIYCPQSSA---SVPSDDLSETLELRKEAYVLQRTINGF 258
           +I+ + S G  L + CSDG L IY P+S +   S PSD     LELRKE YVL+RT+ GF
Sbjct: 18  RIETIESYGAKLFLGCSDGSLXIYGPESFSFDRSPPSDP--NALELRKEPYVLERTVTGF 75

Query: 259 SKKPMFAMEVLVSRQFLIALSEAIAIYRLPNLEIVAVITKAKGANVFSWDDKRGFLCFAR 438
           SKKP+ AMEV  +R  L++LSE+IA +RLPNLE +AVITKAKGANV+SWDD+RGFL FAR
Sbjct: 76  SKKPLVAMEVSGTRDLLLSLSESIAFHRLPNLETIAVITKAKGANVYSWDDRRGFLSFAR 135

Query: 439 QRKVSIFRHDG 471
           Q++V IFRHDG
Sbjct: 136 QKRVCIFRHDG 146


>ref|NP_195381.6| Vacuolar sorting protein 39 [Arabidopsis thaliana]
           gi|20466826|gb|AAM20730.1| unknown protein [Arabidopsis
           thaliana] gi|332661279|gb|AEE86679.1| Vacuolar sorting
           protein 39 [Arabidopsis thaliana]
          Length = 1000

 Score =  157 bits (397), Expect = 8e-37
 Identities = 80/130 (61%), Positives = 99/130 (76%), Gaps = 1/130 (0%)
 Frame = +1

Query: 85  AKIDAVASSGRNLLVSCSDGCLHIYCP-QSSASVPSDDLSETLELRKEAYVLQRTINGFS 261
           A+IDAV S G  L   C DG L IY P +SSAS PS       EL +E YVL++T+ GFS
Sbjct: 17  ARIDAVESYGSKLFAGCYDGSLRIYSPPESSASDPS-------ELHQETYVLEKTVAGFS 69

Query: 262 KKPMFAMEVLVSRQFLIALSEAIAIYRLPNLEIVAVITKAKGANVFSWDDKRGFLCFARQ 441
           KKP+ AMEVL SR+ L++LSE+IA + LPNLE VAVITKAKGAN +SWDD+RGFLCF+RQ
Sbjct: 70  KKPIVAMEVLASRELLLSLSESIAFHGLPNLETVAVITKAKGANAYSWDDRRGFLCFSRQ 129

Query: 442 RKVSIFRHDG 471
           ++V +F+HDG
Sbjct: 130 KRVCVFKHDG 139


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