BLASTX nr result

ID: Bupleurum21_contig00035849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035849
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333000.1| nbs-lrr resistance protein [Populus trichoca...   127   1e-27
ref|XP_003636514.1| NBS-LRR resistance-like protein 1O [Medicago...   117   7e-25
ref|XP_003601846.1| Nucleotide binding site leucine-rich repeat ...   116   2e-24
ref|XP_003619313.1| Nucleotide binding site leucine-rich repeat ...   116   2e-24
ref|XP_002271203.1| PREDICTED: putative disease resistance prote...   114   6e-24

>ref|XP_002333000.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834485|gb|EEE72962.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 963

 Score =  127 bits (318), Expect = 1e-27
 Identities = 66/146 (45%), Positives = 96/146 (65%), Gaps = 3/146 (2%)
 Frame = +1

Query: 43  FEDKSLVVGRDDDISYLVQTLCENC-EEDLKVVAVVGMGGQGKTTLARMVYIKDVVDD-- 213
           F+   L+ GR+ D+S ++  L  +  ++DL V+ +VGM G GKTTLA++V+  D VDD  
Sbjct: 161 FDHPELIKGREADVSKVINLLTSSSNQQDLSVIPIVGMAGIGKTTLAKLVF--DAVDDGE 218

Query: 214 MFSKKMWVTVSDDFDFTKIMNEMVVSLTSNTSALENSEGLIKKLQEHLKGVKFLLVLDDV 393
            F + +WV+VSDDFD   I+  ++V+L+ N   +EN + ++ +LQ+ L+G KFLLVLDDV
Sbjct: 219 FFDETLWVSVSDDFDHQNILGSVLVALSRNMGRVENIDVMVDRLQQELEGKKFLLVLDDV 278

Query: 394 WNDIQEKWDNLINSLLGIGAAKGSGI 471
            N+  EKWD L N  LGI    GS I
Sbjct: 279 LNENYEKWDRLRNFFLGISGINGSAI 304


>ref|XP_003636514.1| NBS-LRR resistance-like protein 1O [Medicago truncatula]
           gi|355502449|gb|AES83652.1| NBS-LRR resistance-like
           protein 1O [Medicago truncatula]
          Length = 969

 Score =  117 bits (294), Expect = 7e-25
 Identities = 60/139 (43%), Positives = 91/139 (65%), Gaps = 1/139 (0%)
 Frame = +1

Query: 28  RKTPPFEDKSLVVGRDDDISYLVQTLCENCE-EDLKVVAVVGMGGQGKTTLARMVYIKDV 204
           R++  F  +S ++GR+DD   ++  L ++ E +++ +VA+VG+GG GKT LA++VY  D 
Sbjct: 156 RESSSFVLESEIIGREDDKKKIISLLRQSHENQNVSLVAIVGIGGLGKTALAQLVYNDDQ 215

Query: 205 VDDMFSKKMWVTVSDDFDFTKIMNEMVVSLTSNTSALENSEGLIKKLQEHLKGVKFLLVL 384
           V ++F K MWV VSD+FD   I+  MV  LT +  A +N E L   L+ +L G ++LLVL
Sbjct: 216 VQNLFEKSMWVCVSDNFDVKTILKNMVALLTKDNIADKNLEELQNMLRANLTGTRYLLVL 275

Query: 385 DDVWNDIQEKWDNLINSLL 441
           DD+WN+  EKWD L   L+
Sbjct: 276 DDIWNESYEKWDELRTYLM 294


>ref|XP_003601846.1| Nucleotide binding site leucine-rich repeat disease resistance
           protein [Medicago truncatula]
           gi|355490894|gb|AES72097.1| Nucleotide binding site
           leucine-rich repeat disease resistance protein [Medicago
           truncatula]
          Length = 1136

 Score =  116 bits (291), Expect = 2e-24
 Identities = 66/152 (43%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
 Frame = +1

Query: 22  EIRKTPPFEDKSLVVGRDDDISYLVQTLCE--NCEEDLKVVAVVGMGGQGKTTLARMVYI 195
           E RKT     +S V GRD D   +V+ L    N  EDL V ++VG+GG GKTTLA++VY 
Sbjct: 142 EWRKTTSVITESEVYGRDKDKEQIVEYLLRHANNSEDLSVYSIVGLGGYGKTTLAQLVYN 201

Query: 196 KDVVDDMFSKKMWVTVSDDFDFTKIMNEMVVSLTSNTSALENSEGLIKKLQEHLKGVKFL 375
            + V   F  K+WV VSDDF   KI++ ++ S T         E + KK+QE L+  ++L
Sbjct: 202 NESVTTHFDLKIWVCVSDDFSMMKILHSIIESATGQNHNFLTLESMQKKVQEVLQSKRYL 261

Query: 376 LVLDDVWNDIQEKWDNLINSLLGIGAAKGSGI 471
           LVLDDVWN  Q KW+ L + L      KG+ I
Sbjct: 262 LVLDDVWNQEQVKWEKLKHFLKSGNTTKGASI 293


>ref|XP_003619313.1| Nucleotide binding site leucine-rich repeat disease resistance
           protein [Medicago truncatula]
           gi|355494328|gb|AES75531.1| Nucleotide binding site
           leucine-rich repeat disease resistance protein [Medicago
           truncatula]
          Length = 1083

 Score =  116 bits (290), Expect = 2e-24
 Identities = 67/152 (44%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
 Frame = +1

Query: 22  EIRKTPPFEDKSLVVGRDDDISYLVQTLCENCE--EDLKVVAVVGMGGQGKTTLARMVYI 195
           E R+T     +S V GRD D   +V+ L  +    EDL V ++VG+GG GKTTLA++VY 
Sbjct: 142 EWRQTTSVITESKVYGRDRDKEQIVEYLLRHASNSEDLSVYSIVGLGGYGKTTLAQLVYK 201

Query: 196 KDVVDDMFSKKMWVTVSDDFDFTKIMNEMVVSLTSNTSALENSEGLIKKLQEHLKGVKFL 375
            + V   F  K+WV VSDDF   KI++ ++ S T     L   E + KK+QE L+  K+L
Sbjct: 202 DESVTTHFDLKIWVCVSDDFSIMKILHSIIESATGQNHNLSTLELMQKKVQEVLQSKKYL 261

Query: 376 LVLDDVWNDIQEKWDNLINSLLGIGAAKGSGI 471
           LVLDDVWN  Q KW+ L + L      KGS I
Sbjct: 262 LVLDDVWNHEQIKWEKLKHYLKSGNTMKGSSI 293


>ref|XP_002271203.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 1179

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/129 (42%), Positives = 85/129 (65%)
 Frame = +1

Query: 52  KSLVVGRDDDISYLVQTLCENCEEDLKVVAVVGMGGQGKTTLARMVYIKDVVDDMFSKKM 231
           +S V GRD D   +++ L +N   D+ V+ +VG+GG GKTTLA++ Y     D  F +++
Sbjct: 169 ESDVCGRDRDREEIIKLLTDNSHGDVSVIPIVGIGGLGKTTLAKLAYNDKRADKHFQQRI 228

Query: 232 WVTVSDDFDFTKIMNEMVVSLTSNTSALENSEGLIKKLQEHLKGVKFLLVLDDVWNDIQE 411
           WV VS+DFD  +IM  ++ S T NT  L+  E + ++++E + G +FLLVLDDVW+D  +
Sbjct: 229 WVCVSEDFDVKRIMRAILESATGNTCHLQEMEVIQQRIRELVMGKRFLLVLDDVWSDDHD 288

Query: 412 KWDNLINSL 438
           KW+ L NS+
Sbjct: 289 KWERLKNSV 297


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