BLASTX nr result

ID: Bupleurum21_contig00035835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035835
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274217.1| PREDICTED: uncharacterized protein LOC100258...    81   8e-14
ref|XP_003596840.1| hypothetical protein MTR_2g086680 [Medicago ...    75   5e-12
ref|XP_002523833.1| conserved hypothetical protein [Ricinus comm...    74   9e-12
ref|XP_002313489.1| predicted protein [Populus trichocarpa] gi|1...    73   3e-11
gb|AFK37535.1| unknown [Lotus japonicus]                               72   4e-11

>ref|XP_002274217.1| PREDICTED: uncharacterized protein LOC100258720 [Vitis vinifera]
           gi|147828169|emb|CAN68427.1| hypothetical protein
           VITISV_031997 [Vitis vinifera]
           gi|296084887|emb|CBI28296.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
 Frame = +3

Query: 3   YDYSGIVVMVRC---KKVSVTKTSKNGTFMITLPTDMSASLPSSNCIAKILSSKEQLYIE 173
           +D+SGI V+V+C   KK+++  T  +G+F   LP+D   S P  NC+AK+L    QLY  
Sbjct: 40  HDFSGIKVLVKCDRVKKLAMATTEADGSFKTNLPSDTQTSSPPLNCLAKLLGGPNQLYAF 99

Query: 174 KANMITKVKTATSESDSSGYTISNPLSFFTLCPFS 278
           + N ++K+  A    D S YTIS PLSF T CP S
Sbjct: 100 RKNTVSKIVKA---RDDSSYTISTPLSFSTTCPSS 131


>ref|XP_003596840.1| hypothetical protein MTR_2g086680 [Medicago truncatula]
           gi|355485888|gb|AES67091.1| hypothetical protein
           MTR_2g086680 [Medicago truncatula]
          Length = 172

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
 Frame = +3

Query: 3   YDYSGIVVMVRC---KKVSVTKTSKNGTFMITLPTDMSASLPSSNCIAKILSSKEQLYIE 173
           YD+SGI V ++C   K +++  T  +G+FM+ L T   A LP  NC AK+L     LY  
Sbjct: 40  YDFSGIKVSMKCEGVKNMAMATTENDGSFMVDLSTS-HAKLPYDNCHAKLLGGPNNLYAS 98

Query: 174 KANMITKVKTATSESDSSGYTISNPLSFFTLCPFSKDECQVKKS 305
           + N  +++     E+    YT+S PLSFFT CP +K EC+ +K+
Sbjct: 99  RRNQFSQIVKGKEENS---YTLSTPLSFFTSCPQNK-ECKTEKN 138


>ref|XP_002523833.1| conserved hypothetical protein [Ricinus communis]
           gi|223536921|gb|EEF38559.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 169

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
 Frame = +3

Query: 3   YDYSGIVVMVRC---KKVSVTKTSKNGTFMITLPTDMSASLPSSNCIAKILSSKEQLYIE 173
           YD+SGI V+V+C   KK++ T T   G+F + LP+  S +    NC+AK++    Q+Y  
Sbjct: 40  YDFSGIKVLVKCANVKKLATTTTKSKGSFEVELPSGNSKAETPLNCLAKLIGGTSQIYAT 99

Query: 174 KANMITKVKTATSESDSSGYTISNPLSFFTLCP 272
           + NM++++       DSS YTIS PL+F T  P
Sbjct: 100 RKNMVSRI---VKTKDSSSYTISTPLAFSTAFP 129


>ref|XP_002313489.1| predicted protein [Populus trichocarpa] gi|118488493|gb|ABK96060.1|
           unknown [Populus trichocarpa]
           gi|222849897|gb|EEE87444.1| predicted protein [Populus
           trichocarpa]
          Length = 173

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
 Frame = +3

Query: 3   YDYSGIVVMVRCKKV---SVTKTSKNGTFMITLPTDMSASLPSSNCIAKILSSKEQLYIE 173
           YDYS I V V+C KV   + T T  +G+F + LP   S +     C+AK+L    QLY+ 
Sbjct: 40  YDYSEIKVGVKCDKVRKLATTTTQSDGSFEVKLPPGTSTAATPLICLAKLLGGPSQLYVS 99

Query: 174 KANMITKVKTATSESDSSGYTISNPLSFFTLCPFSKDECQV 296
           + NM++K+       DS+ YTIS PL+F + C     +C V
Sbjct: 100 RQNMVSKI---VQTHDSNSYTISTPLAFSSTCSAGGGKCGV 137


>gb|AFK37535.1| unknown [Lotus japonicus]
          Length = 149

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
 Frame = +3

Query: 3   YDYSGIVVMVRCK----KVSVTKTSKNGTFMITLPTDMSASLPSSNCIAKILSSKEQLYI 170
           YD+SGI V V+C+    K   T T ++G+F + LP+  + S PS  C+AK+L   + LY 
Sbjct: 15  YDFSGIKVSVKCEGVQNKALTTTTEEDGSFKVHLPSHYAKS-PSMKCLAKLLGGPDLLYA 73

Query: 171 EKANMITKVKTATSESDSSGYTISNPLSFFTLCPFSKDECQ 293
            + N ++ +  A  E+    YTIS PLSFFT CP    EC+
Sbjct: 74  SRKNRVSLIVKAKEENI---YTISTPLSFFTYCP-QNSECK 110


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