BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035831
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14
ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14
ref|XP_003595556.1| Pentatricopeptide repeat protein [Medicago t...    78   7e-13
ref|XP_002534377.1| hypothetical protein RCOM_0229940 [Ricinus c...    65   8e-09
ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07

>ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 706

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 1/126 (0%)
 Frame = +1

Query: 1   YSSFICNLYKFGDFKKTLFVYQELVVKSMYPDEYTYMFVLKSCLELCDVKSWEKILVHVI 180
           +++ + NL ++G+ ++TL VYQ++V KSM+PDE TY FVL+SC    +V     I  +++
Sbjct: 93  FNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLV 152

Query: 181 KLGYDCFDVVAXXXXXXXXXXXXXXXXAHNVFEEKT-GDVGFWNSLIFEACKSCEYKNSF 357
           KLG+D FDVVA                AH +F++++  D+G+ +SL  E  ++   +  F
Sbjct: 153 KLGFDLFDVVA-TALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIF 211

Query: 358 RLFERM 375
           R+F RM
Sbjct: 212 RVFGRM 217


>ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 722

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 1/126 (0%)
 Frame = +1

Query: 1   YSSFICNLYKFGDFKKTLFVYQELVVKSMYPDEYTYMFVLKSCLELCDVKSWEKILVHVI 180
           +++ + NL ++G+ ++TL VYQ++V KSM+PDE TY FVL+SC    +V     I  +++
Sbjct: 93  FNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLV 152

Query: 181 KLGYDCFDVVAXXXXXXXXXXXXXXXXAHNVFEEKT-GDVGFWNSLIFEACKSCEYKNSF 357
           KLG+D FDVVA                AH +F++++  D+G+ +SL  E  ++   +  F
Sbjct: 153 KLGFDLFDVVA-TALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIF 211

Query: 358 RLFERM 375
           R+F RM
Sbjct: 212 RVFGRM 217


>ref|XP_003595556.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355484604|gb|AES65807.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 1040

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
 Frame = +1

Query: 1   YSSFICNLYKFGDFKKTLFVYQELVVKSMYPDEYTYMFVLKSCLELCDVKSWEKIL-VHV 177
           Y++F+ NL+ FG+++KTLF+Y+E+V KSM PDE     VLKS   +   K    +   HV
Sbjct: 87  YNAFLRNLFMFGEYEKTLFLYKEMVQKSMCPDEDCCFSVLKSLFYVFHEKGLIMMAHGHV 146

Query: 178 IKLGYDCFDVVAXXXXXXXXXXXXXXXXAHNVFEEKT-GDVGFWNSLIFEACKSCEYKNS 354
           +KLG D FD+V                  + + E K+   + FWN+LI+EA +S +   S
Sbjct: 147 VKLGMDAFDLVG-----NTLIELYGFLNGNGLVERKSVTKLNFWNNLIYEAYESGKIVES 201

Query: 355 FRLFERMK 378
           F LF RM+
Sbjct: 202 FELFCRMR 209


>ref|XP_002534377.1| hypothetical protein RCOM_0229940 [Ricinus communis]
           gi|223525402|gb|EEF28001.1| hypothetical protein
           RCOM_0229940 [Ricinus communis]
          Length = 131

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 35/98 (35%), Positives = 51/98 (52%)
 Frame = +1

Query: 85  MYPDEYTYMFVLKSCLELCDVKSWEKILVHVIKLGYDCFDVVAXXXXXXXXXXXXXXXXA 264
           MYPDE  Y FVL SC  L DV + + I  H+ KLG++ F ++                  
Sbjct: 1   MYPDEEAYPFVLASCSSLLDVVNGKVIHGHLTKLGFESFYLLGAALIEMYGSSADFENER 60

Query: 265 HNVFEEKTGDVGFWNSLIFEACKSCEYKNSFRLFERMK 378
           H    + + D+ +WNSLIFEA K+   K SF  +++M+
Sbjct: 61  HVDNGKSSCDLSYWNSLIFEASKTGNIKESFLFYKKMR 98


>ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 607

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
 Frame = +1

Query: 70  LVVKSMYPDEYTYMFVLKSCLELCDVKSWEKILVHVIKLGYDCFDVVAXXXXXXXXXXXX 249
           +V KSM+PDE TY FVL+SC    +V     I  +++KLG+D FDVVA            
Sbjct: 1   MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVA-TALAEMYEECI 59

Query: 250 XXXXAHNVFEEKT-GDVGFWNSLIFEACKSCEYKNSFRLFERM 375
               AH +F++++  D+G+ +SL  E  ++   +  FR+F RM
Sbjct: 60  EFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRM 102