BLASTX nr result

ID: Bupleurum21_contig00035809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035809
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299868.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002283389.2| PREDICTED: telomere repeat-binding protein 5...    95   5e-18
emb|CBI16113.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002534561.1| conserved hypothetical protein [Ricinus comm...    95   7e-18
ref|XP_002313432.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16

>ref|XP_002299868.1| predicted protein [Populus trichocarpa] gi|222847126|gb|EEE84673.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 54/102 (52%), Positives = 66/102 (64%), Gaps = 5/102 (4%)
 Frame = +3

Query: 3   RVGVLVHGKKIRDDNKTLVQTGIYDNNKNGALGFTLEPLSSHMPATQCPEDYSL-----T 167
           RVGVL+ GKK+RDDNKTL+QTGI  NN+  +LGF LEP  S  P + CPED        T
Sbjct: 13  RVGVLLQGKKVRDDNKTLLQTGISHNNQLDSLGFCLEPNPSQTPPSLCPEDSPFLLQCDT 72

Query: 168 PSQQLTRCPHASIIVKQGNPDVSPDLPSTNFGNIIESDHDSA 293
           P   ++RCP  + +V QG    SP+  + N GN IESDHDSA
Sbjct: 73  P-DPISRCPPTAGVVCQGICTGSPEPHANNLGNCIESDHDSA 113


>ref|XP_002283389.2| PREDICTED: telomere repeat-binding protein 5-like [Vitis vinifera]
          Length = 696

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 53/102 (51%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
 Frame = +3

Query: 3   RVGVLVHGKKIRDDNKTLVQTGIYDNNKNGALGFTLEPLSSHMPATQCPEDYSL-----T 167
           RVGVL+ GKK+RDD+KTL QTGI  +++  ALGFTLEP  S  P   CP D        T
Sbjct: 447 RVGVLLRGKKVRDDSKTLQQTGISQDDQMDALGFTLEPNPSQAPQALCPGDNPFLLPYDT 506

Query: 168 PSQQLTRCPHASIIVKQGNPDVSPDLPSTNFGNIIESDHDSA 293
           P Q L R P    +  QG  D SPD P TN  + +ESDHDSA
Sbjct: 507 P-QPLKRYPPTPTVAHQGTSDASPDPPVTNLCDFVESDHDSA 547


>emb|CBI16113.3| unnamed protein product [Vitis vinifera]
          Length = 646

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 53/102 (51%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
 Frame = +3

Query: 3   RVGVLVHGKKIRDDNKTLVQTGIYDNNKNGALGFTLEPLSSHMPATQCPEDYSL-----T 167
           RVGVL+ GKK+RDD+KTL QTGI  +++  ALGFTLEP  S  P   CP D        T
Sbjct: 397 RVGVLLRGKKVRDDSKTLQQTGISQDDQMDALGFTLEPNPSQAPQALCPGDNPFLLPYDT 456

Query: 168 PSQQLTRCPHASIIVKQGNPDVSPDLPSTNFGNIIESDHDSA 293
           P Q L R P    +  QG  D SPD P TN  + +ESDHDSA
Sbjct: 457 P-QPLKRYPPTPTVAHQGTSDASPDPPVTNLCDFVESDHDSA 497


>ref|XP_002534561.1| conserved hypothetical protein [Ricinus communis]
           gi|223525029|gb|EEF27822.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 688

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 54/101 (53%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
 Frame = +3

Query: 3   RVGVLVHGKKIRDDNKTLVQTGIYDNNKNGALGFTLEPLSSHMPATQCPEDYSLTPS--- 173
           RVGVL+ GKK+RDDNKTL+QTGI  NN+  ALGF+LEP  S  P +  P   S  PS   
Sbjct: 439 RVGVLLQGKKVRDDNKTLMQTGIAHNNQLDALGFSLEPNPSQTPHSLSPGSSSFLPSCDT 498

Query: 174 -QQLTRCPHASIIVKQGNPDVSPDLPSTNFGNIIESDHDSA 293
            Q L+R P    +V Q     SP+  S N GN IESDHDSA
Sbjct: 499 PQPLSRYPPDPSLVHQATCGGSPEPHSANLGNFIESDHDSA 539


>ref|XP_002313432.1| predicted protein [Populus trichocarpa] gi|222849840|gb|EEE87387.1|
           predicted protein [Populus trichocarpa]
          Length = 673

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 52/101 (51%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
 Frame = +3

Query: 3   RVGVLVHGKKIRDDNKTLVQTGIYDNNKNGALGFTLEPLSSHMPATQCPED----YSLTP 170
           RVGVL+ GKK+R+DNKTL QTGI  NN+  ALGF LEP  S +P + CP D         
Sbjct: 435 RVGVLLQGKKVREDNKTLQQTGISRNNQLDALGFCLEPNPSQIPPSLCPGDSPFFLQCDA 494

Query: 171 SQQLTRCPHASIIVKQGNPDVSPDLPSTNFGNIIESDHDSA 293
            Q + R PH + +V QG   V P+  + N GN IESDHDSA
Sbjct: 495 PQPILRYPHTTGVVHQGICAV-PEPHANNLGNYIESDHDSA 534


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