BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035800
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   139   2e-31
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              139   2e-31
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   139   2e-31
ref|XP_003538711.1| PREDICTED: DNA-directed RNA polymerase D sub...   131   6e-29
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...   131   6e-29

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  139 bits (350), Expect = 2e-31
 Identities = 74/111 (66%), Positives = 86/111 (77%)
 Frame = +3

Query: 3    QTSAALCQVSVSAFKQVFRDIQNLFYQFAGNDNSFLAMLKAGSKKSNLIKAVQHAMCLGL 182
            Q SAALCQ SV AFKQ FRDIQNL YQ+A  DNS LAMLKAGS K NL+K VQ  +CLGL
Sbjct: 724  QGSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGS-KGNLLKLVQQGLCLGL 782

Query: 183  QHSLAPLSFRIPEELSCVAWNSQKELESLDLTDDHREFSKSYIPYAVVPSS 335
            QHSL PLSF+IP +LSC AWN QK +  L + +D  E+++SYIPYAVV +S
Sbjct: 783  QHSLVPLSFKIPHQLSCAAWNKQK-VPGL-IQNDTSEYAESYIPYAVVENS 831


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  139 bits (350), Expect = 2e-31
 Identities = 74/111 (66%), Positives = 86/111 (77%)
 Frame = +3

Query: 3   QTSAALCQVSVSAFKQVFRDIQNLFYQFAGNDNSFLAMLKAGSKKSNLIKAVQHAMCLGL 182
           Q SAALCQ SV AFKQ FRDIQNL YQ+A  DNS LAMLKAGS K NL+K VQ  +CLGL
Sbjct: 593 QGSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGS-KGNLLKLVQQGLCLGL 651

Query: 183 QHSLAPLSFRIPEELSCVAWNSQKELESLDLTDDHREFSKSYIPYAVVPSS 335
           QHSL PLSF+IP +LSC AWN QK +  L + +D  E+++SYIPYAVV +S
Sbjct: 652 QHSLVPLSFKIPHQLSCAAWNKQK-VPGL-IQNDTSEYAESYIPYAVVENS 700


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  139 bits (350), Expect = 2e-31
 Identities = 74/111 (66%), Positives = 86/111 (77%)
 Frame = +3

Query: 3    QTSAALCQVSVSAFKQVFRDIQNLFYQFAGNDNSFLAMLKAGSKKSNLIKAVQHAMCLGL 182
            Q SAALCQ SV AFKQ FRDIQNL YQ+A  DNS LAMLKAGS K NL+K VQ  +CLGL
Sbjct: 694  QGSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGS-KGNLLKLVQQGLCLGL 752

Query: 183  QHSLAPLSFRIPEELSCVAWNSQKELESLDLTDDHREFSKSYIPYAVVPSS 335
            QHSL PLSF+IP +LSC AWN QK +  L + +D  E+++SYIPYAVV +S
Sbjct: 753  QHSLVPLSFKIPHQLSCAAWNKQK-VPGL-IQNDTSEYAESYIPYAVVENS 801


>ref|XP_003538711.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Glycine max]
          Length = 1461

 Score =  131 bits (329), Expect = 6e-29
 Identities = 68/111 (61%), Positives = 85/111 (76%)
 Frame = +3

Query: 3    QTSAALCQVSVSAFKQVFRDIQNLFYQFAGNDNSFLAMLKAGSKKSNLIKAVQHAMCLGL 182
            Q SAAL Q SV AF+QVFR+IQ+L  ++A  DN+FLAM KAGSK  NL+K VQH+MCLG+
Sbjct: 696  QISAALSQASVDAFRQVFRNIQSLADKYACKDNAFLAMFKAGSK-GNLLKLVQHSMCLGM 754

Query: 183  QHSLAPLSFRIPEELSCVAWNSQKELESLDLTDDHREFSKSYIPYAVVPSS 335
            Q+SL  LS+R+P  LSC AWNSQK L+S+ ++    E  +SYIPYAVV SS
Sbjct: 755  QNSLVRLSYRLPRHLSCAAWNSQKWLDSIQMSSGTLESVQSYIPYAVVESS 805


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
            gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
            [Populus trichocarpa]
          Length = 1517

 Score =  131 bits (329), Expect = 6e-29
 Identities = 70/111 (63%), Positives = 80/111 (72%)
 Frame = +3

Query: 3    QTSAALCQVSVSAFKQVFRDIQNLFYQFAGNDNSFLAMLKAGSKKSNLIKAVQHAMCLGL 182
            Q SAAL Q SV AF+ VFRDIQ+L Y++A  DNSFLAM KAGSK  NL+K VQH+MCLGL
Sbjct: 745  QRSAALSQSSVDAFRLVFRDIQSLVYKYASQDNSFLAMFKAGSK-GNLLKLVQHSMCLGL 803

Query: 183  QHSLAPLSFRIPEELSCVAWNSQKELESLDLTDDHREFSKSYIPYAVVPSS 335
            QH+LA LSFRIP +LSC  WN QK        DD  E +K YIP+AVV  S
Sbjct: 804  QHALASLSFRIPHQLSCAGWNKQK-------ADDATESAKRYIPHAVVEGS 847