BLASTX nr result

ID: Bupleurum21_contig00035778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035778
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62421.1| hypothetical protein VITISV_020606 [Vitis vinifera]   105   4e-21
ref|XP_002301544.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
emb|CBI39657.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002280231.1| PREDICTED: pleiotropic drug resistance prote...    95   5e-18
emb|CAN65735.1| hypothetical protein VITISV_037751 [Vitis vinifera]    95   5e-18

>emb|CAN62421.1| hypothetical protein VITISV_020606 [Vitis vinifera]
          Length = 1798

 Score =  105 bits (262), Expect = 4e-21
 Identities = 55/121 (45%), Positives = 74/121 (61%)
 Frame = +3

Query: 18   RKFKEYHLGQKINDDLSQNSHKDVRHDTALTFHTKSMRNWEIFKACMAREWVLMKRNSFV 197
            R FKE+ +GQK+ ++LS  S K    + AL+F+  S+  WE+FKACMAREW+LMKRNSF+
Sbjct: 1622 RIFKEFPVGQKLAEELSMPSDKSESQNNALSFNAYSLGKWELFKACMAREWLLMKRNSFI 1681

Query: 198  HAFKSAQV*VILVRVKRNKKERYDNHPNVLYFQLVVSALITMTVFLRTQTSINVIDANYF 377
            H FKSA                          QLVV ALITMT F+RTQ +++V  +NY+
Sbjct: 1682 HVFKSA--------------------------QLVVIALITMTTFIRTQMTVDVFHSNYY 1715

Query: 378  L 380
            +
Sbjct: 1716 M 1716


>ref|XP_002301544.1| predicted protein [Populus trichocarpa] gi|222843270|gb|EEE80817.1|
           predicted protein [Populus trichocarpa]
          Length = 1368

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/123 (40%), Positives = 72/123 (58%)
 Frame = +3

Query: 12  LARKFKEYHLGQKINDDLSQNSHKDVRHDTALTFHTKSMRNWEIFKACMAREWVLMKRNS 191
           L + F+E+H+GQK+  +LS+   K   H  AL+F   S+R WE+FK CM REW+LMKRN 
Sbjct: 445 LVKNFQEFHVGQKLEGELSRPLQKSESHKNALSFSIYSLRKWELFKVCMDREWLLMKRNL 504

Query: 192 FVHAFKSAQV*VILVRVKRNKKERYDNHPNVLYFQLVVSALITMTVFLRTQTSINVIDAN 371
            +H FKS                           QLVV+ALITMTVF+R++ +I+++D N
Sbjct: 505 SLHVFKSV--------------------------QLVVTALITMTVFIRSRMNIDMVDGN 538

Query: 372 YFL 380
            ++
Sbjct: 539 LYM 541


>emb|CBI39657.3| unnamed protein product [Vitis vinifera]
          Length = 1406

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 51/122 (41%), Positives = 71/122 (58%)
 Frame = +3

Query: 15  ARKFKEYHLGQKINDDLSQNSHKDVRHDTALTFHTKSMRNWEIFKACMAREWVLMKRNSF 194
           +RKFKE   G+K+ + LS+   K   H  AL+F   S+  WE+F+ACM+RE++LMKRNSF
Sbjct: 437 SRKFKESPFGKKLEEKLSKPFDKSHSHKNALSFSKYSLSKWELFRACMSREFLLMKRNSF 496

Query: 195 VHAFKSAQV*VILVRVKRNKKERYDNHPNVLYFQLVVSALITMTVFLRTQTSINVIDANY 374
           ++ FKS                           QLV+ A ITMTVFLRT+  +++I ANY
Sbjct: 497 IYVFKST--------------------------QLVIIAAITMTVFLRTRMDVDIIHANY 530

Query: 375 FL 380
           +L
Sbjct: 531 YL 532


>ref|XP_002280231.1| PREDICTED: pleiotropic drug resistance protein 3-like [Vitis
           vinifera]
          Length = 1448

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 51/122 (41%), Positives = 71/122 (58%)
 Frame = +3

Query: 15  ARKFKEYHLGQKINDDLSQNSHKDVRHDTALTFHTKSMRNWEIFKACMAREWVLMKRNSF 194
           +RKFKE   G+K+ + LS+   K   H  AL+F   S+  WE+F+ACM+RE++LMKRNSF
Sbjct: 479 SRKFKESPFGKKLEEKLSKPFDKSHSHKNALSFSKYSLSKWELFRACMSREFLLMKRNSF 538

Query: 195 VHAFKSAQV*VILVRVKRNKKERYDNHPNVLYFQLVVSALITMTVFLRTQTSINVIDANY 374
           ++ FKS                           QLV+ A ITMTVFLRT+  +++I ANY
Sbjct: 539 IYVFKST--------------------------QLVIIAAITMTVFLRTRMDVDIIHANY 572

Query: 375 FL 380
           +L
Sbjct: 573 YL 574


>emb|CAN65735.1| hypothetical protein VITISV_037751 [Vitis vinifera]
          Length = 1417

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 51/122 (41%), Positives = 71/122 (58%)
 Frame = +3

Query: 15  ARKFKEYHLGQKINDDLSQNSHKDVRHDTALTFHTKSMRNWEIFKACMAREWVLMKRNSF 194
           +RKFKE   G+K+ + LS+   K   H  AL+F   S+  WE+F+ACM+RE++LMKRNSF
Sbjct: 466 SRKFKESPFGKKLEEKLSKPFDKSHSHKNALSFSKYSLSKWELFRACMSREFLLMKRNSF 525

Query: 195 VHAFKSAQV*VILVRVKRNKKERYDNHPNVLYFQLVVSALITMTVFLRTQTSINVIDANY 374
           ++ FKS                           QLV+ A ITMTVFLRT+  +++I ANY
Sbjct: 526 IYVFKST--------------------------QLVIIAAITMTVFLRTRMDVDIIHANY 559

Query: 375 FL 380
           +L
Sbjct: 560 YL 561


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