BLASTX nr result

ID: Bupleurum21_contig00035774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035774
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cu...   249   1e-64
ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cu...   249   1e-64
ref|XP_003541412.1| PREDICTED: auxin response factor 18-like [Gl...   247   8e-64
ref|XP_003537296.1| PREDICTED: auxin response factor 18-like [Gl...   246   1e-63
gb|ACI13681.1| putative auxin response factor ARF16 [Malus x dom...   242   3e-62

>ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 701

 Score =  249 bits (637), Expect = 1e-64
 Identities = 118/128 (92%), Positives = 121/128 (94%)
 Frame = +2

Query: 5   EQD*PTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKF 184
           EQD PTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKF
Sbjct: 113 EQDKPTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKF 172

Query: 185 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGVRRAKKGIEGNSEST 364
           RHIYRGTPRRHLLTTGWSTFVN KKLVAGDSIVFLRAENGDLCVG+RRAK+GI    ES+
Sbjct: 173 RHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESS 232

Query: 365 SGWNPAGG 388
            GWNPAGG
Sbjct: 233 CGWNPAGG 240


>ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 698

 Score =  249 bits (637), Expect = 1e-64
 Identities = 118/128 (92%), Positives = 121/128 (94%)
 Frame = +2

Query: 5   EQD*PTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKF 184
           EQD PTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKF
Sbjct: 113 EQDKPTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKF 172

Query: 185 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGVRRAKKGIEGNSEST 364
           RHIYRGTPRRHLLTTGWSTFVN KKLVAGDSIVFLRAENGDLCVG+RRAK+GI    ES+
Sbjct: 173 RHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESS 232

Query: 365 SGWNPAGG 388
            GWNPAGG
Sbjct: 233 CGWNPAGG 240


>ref|XP_003541412.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 647

 Score =  247 bits (630), Expect = 8e-64
 Identities = 116/129 (89%), Positives = 121/129 (93%)
 Frame = +2

Query: 2   DEQD*PTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWK 181
           + +D P SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQ ILAKDVHGETWK
Sbjct: 109 ETRDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWK 168

Query: 182 FRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGVRRAKKGIEGNSES 361
           FRHIYRGTPRRHLLTTGWSTFVN KKLVAGDSIVFLRAENGDLCVG+RRAKKGI G  E+
Sbjct: 169 FRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGLET 228

Query: 362 TSGWNPAGG 388
           +SGWNPAGG
Sbjct: 229 SSGWNPAGG 237


>ref|XP_003537296.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 700

 Score =  246 bits (628), Expect = 1e-63
 Identities = 116/129 (89%), Positives = 120/129 (93%)
 Frame = +2

Query: 2   DEQD*PTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWK 181
           + QD P SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYS DPPVQ ILAKDVHGETWK
Sbjct: 110 ETQDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSVDPPVQNILAKDVHGETWK 169

Query: 182 FRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGVRRAKKGIEGNSES 361
           FRHIYRGTPRRHLLTTGWSTFVN KKLVAGDSIVFLRAENGDLCVG+RRAKKGI G  E+
Sbjct: 170 FRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGICGGLET 229

Query: 362 TSGWNPAGG 388
           +SGWNPAGG
Sbjct: 230 SSGWNPAGG 238


>gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
          Length = 702

 Score =  242 bits (617), Expect = 3e-62
 Identities = 115/126 (91%), Positives = 119/126 (94%)
 Frame = +2

Query: 11  D*PTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRH 190
           D P SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRH
Sbjct: 116 DKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRH 175

Query: 191 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGVRRAKKGIEGNSESTSG 370
           IYRGTPRRHLLTTG STFVN KKLV+GDSIVFLRAENGDLCVG+RRAK+GI G SES+SG
Sbjct: 176 IYRGTPRRHLLTTGSSTFVNHKKLVSGDSIVFLRAENGDLCVGIRRAKRGIGGGSESSSG 235

Query: 371 WNPAGG 388
           WNP GG
Sbjct: 236 WNPMGG 241


Top