BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035745
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   207   7e-52
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   202   2e-50
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   200   1e-49
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   199   2e-49
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...   199   3e-49

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  207 bits (528), Expect = 7e-52
 Identities = 87/181 (48%), Positives = 135/181 (74%)
 Frame = -3

Query: 543 LYLGLPNMMKRKKTAVLGYLKDRLCDRLQGWDNKLISKGGKEILLKTVAQAIPNYAMSMF 364
           +YLG+P ++ + K  +  +++ ++ +R+Q W+ + +S+ GKEI LKTVAQ+IP Y M + 
Sbjct: 217 IYLGMPAVVGKNKRQLFEFVRRKVWNRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQLL 276

Query: 363 LLPQEMCKDLETLMNRYWWKSNKKEKGIHWKCWEKLCKAKKDGGLGFRQVHDFNIALLGK 184
           LLP+++C+D+E++MN ++W SN + + I W  W K+CK KKDGGLGFR++ DFN+ALL K
Sbjct: 277 LLPKDLCRDIESMMNGFFWDSNPQCRSIRWMSWGKMCKQKKDGGLGFRKLXDFNLALLAK 336

Query: 183 QGWRLIMYPESLVSKLYKARYYSQGNFLTASIGKNPSYIWRSIMASQDLLKSGLARRVGS 4
           QGWR +  P+SLV+++++ARY+   +FL A +G NPSY+WRSI+A+Q LLK G    + S
Sbjct: 337 QGWRFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPSYMWRSILAAQGLLKRGCYWSIAS 396

Query: 3   G 1
           G
Sbjct: 397 G 397


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  202 bits (515), Expect = 2e-50
 Identities = 86/181 (47%), Positives = 133/181 (73%)
 Frame = -3

Query: 543  LYLGLPNMMKRKKTAVLGYLKDRLCDRLQGWDNKLISKGGKEILLKTVAQAIPNYAMSMF 364
            +YLG+P ++ + K  +  +++ ++ +R+Q W+ + +S+ GKEI LKTVAQ+IP Y M + 
Sbjct: 1304 IYLGMPAVVGKNKRQLFEFVRRKVWNRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQLL 1363

Query: 363  LLPQEMCKDLETLMNRYWWKSNKKEKGIHWKCWEKLCKAKKDGGLGFRQVHDFNIALLGK 184
            LLP+++C+D+E++MN ++W SN + + I W  W K+CK KKDGGLGFR++ DFN+ALL K
Sbjct: 1364 LLPKDLCRDIESMMNXFFWDSNPQXRSIRWMSWXKMCKQKKDGGLGFRKLEDFNLALLAK 1423

Query: 183  QGWRLIMYPESLVSKLYKARYYSQGNFLTASIGKNPSYIWRSIMASQDLLKSGLARRVGS 4
            QG R +   +SLV+ +++ARY+   +FL A +G NPSY+WRSI+A+QDLLK G    + S
Sbjct: 1424 QGXRFLQNLDSLVTIIFQARYFRNSSFLNAELGSNPSYMWRSILAAQDLLKMGCYWSIAS 1483

Query: 3    G 1
            G
Sbjct: 1484 G 1484


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score =  200 bits (509), Expect = 1e-49
 Identities = 86/181 (47%), Positives = 132/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 540 YLGLPNMMKRKKTAVLGYLKDRLCDRLQGWDNKLISKGGKEILLKTVAQAIPNYAMSMFL 361
           YLGLP+M+ R K ++  Y+KDR+ +R+ G  +K++S+ GKE+L+K+VAQAIP+Y MS+FL
Sbjct: 342 YLGLPSMIGRSKKSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSVAQAIPSYCMSVFL 401

Query: 360 LPQEMCKDLETLMNRYWW-KSNKKEKGIHWKCWEKLCKAKKDGGLGFRQVHDFNIALLGK 184
           LP  +  D+E ++N +WW   N+   GI W  WE+L   K+ GG+GFR +H F++A+ GK
Sbjct: 402 LPHSIADDIEKMLNSFWWGMKNEGRGGIRWMSWERLTMRKEWGGMGFRHIHGFDLAMSGK 461

Query: 183 QGWRLIMYPESLVSKLYKARYYSQGNFLTASIGKNPSYIWRSIMASQDLLKSGLARRVGS 4
           Q W  +  P+++VS+++KA+Y++  NFL AS+G NPSY+WRSI +S+  LK+G   R+G 
Sbjct: 462 QCWNFLTNPDAMVSRIFKAKYFTNENFLGASLGHNPSYVWRSIWSSRIFLKTGYQWRIGD 521

Query: 3   G 1
           G
Sbjct: 522 G 522


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  199 bits (506), Expect = 2e-49
 Identities = 91/180 (50%), Positives = 127/180 (70%)
 Frame = -3

Query: 540  YLGLPNMMKRKKTAVLGYLKDRLCDRLQGWDNKLISKGGKEILLKTVAQAIPNYAMSMFL 361
            YLGLP +  + K  +   L DR+ +R+ GW+ KL+SK GKE+L+KTVAQAIPNY MS+F 
Sbjct: 1038 YLGLPTVSGKDKKKLFQSLPDRVWNRVHGWEGKLLSKAGKEVLIKTVAQAIPNYTMSVFQ 1097

Query: 360  LPQEMCKDLETLMNRYWWKSNKKEKGIHWKCWEKLCKAKKDGGLGFRQVHDFNIALLGKQ 181
            LP      +   + R+WW   +  KGIHW+ W  LC +KKDGGLGFR +  FN ALLGKQ
Sbjct: 1098 LPAGTSDAINKCVARFWW-GKEGGKGIHWRRWSDLCFSKKDGGLGFRDLSLFNQALLGKQ 1156

Query: 180  GWRLIMYPESLVSKLYKARYYSQGNFLTASIGKNPSYIWRSIMASQDLLKSGLARRVGSG 1
            GWRL+MYP+SLV+++ KA+Y+   +F+ A +G +PSY+WRS +  ++LL+ G+  R+G G
Sbjct: 1157 GWRLMMYPDSLVARMLKAKYFPWDDFMEAELGSSPSYLWRSFLWGRELLRKGVRWRIGDG 1216


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score =  199 bits (505), Expect = 3e-49
 Identities = 88/178 (49%), Positives = 127/178 (71%)
 Frame = -3

Query: 534 GLPNMMKRKKTAVLGYLKDRLCDRLQGWDNKLISKGGKEILLKTVAQAIPNYAMSMFLLP 355
           GLP  +   K AVLG++K+R+  RL GW  K +S  G+E+L+K+VAQAIP Y MS F LP
Sbjct: 1   GLPYCVGHSKRAVLGFVKERVWTRLNGWKEKFLSVAGREVLIKSVAQAIPTYIMSCFRLP 60

Query: 354 QEMCKDLETLMNRYWWKSNKKEKGIHWKCWEKLCKAKKDGGLGFRQVHDFNIALLGKQGW 175
             +C ++E+++  +WW   ++ + IHW  W++LCK+K  GG+GFR +  FN ALL KQ W
Sbjct: 61  DGVCHEIESMVCNFWWXQKEETRKIHWTSWKQLCKSKLQGGMGFRCLQXFNSALLAKQCW 120

Query: 174 RLIMYPESLVSKLYKARYYSQGNFLTASIGKNPSYIWRSIMASQDLLKSGLARRVGSG 1
           RL+  P+SLV++++KARY+ Q +FL A +G NPS+ WRSI+ S+ LL +GL  RVG+G
Sbjct: 121 RLVQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWRSIVGSRSLLNAGLRWRVGNG 178