BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035730
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    79   4e-13
ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    76   5e-12
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
 Frame = -1

Query: 445 VSWSTFVWFSAGSVPRFSFCSWLAYKGRLYTKNKLMSFGVLDNATCSLCGTDIETEE*HL 266
           V W   VWF    +P+ +F  W+A   RL+T+++L  +G+     C LC    ET + HL
Sbjct: 152 VPWQKSVWFK-DRIPKHAFICWVAAWKRLHTRDRLTQWGLNIPTVCVLCNVVDETHD-HL 209

Query: 265 FFECFYSTQI----IKACPYVVPTNFHAI---ISSTELSDSFHLQILKLFITTSIYYIWQ 107
           FF+C +S +I    +       P  F  I   + S   S +  L I+KL    S+Y IW+
Sbjct: 210 FFQCQFSNEIWSFFMIRAGMTPPHLFGPILLWLKSASSSKNLSL-IIKLLFQASVYLIWR 268

Query: 106 QRNCRIWSPAEALTPVQIIQRVKVLIRQKI 17
           +RNCRI +   + TP  II+ V+ LIR ++
Sbjct: 269 ERNCRIHT-THSRTPPTIIKEVQQLIRARL 297


>ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|222846342|gb|EEE83889.1|
            predicted protein [Populus trichocarpa]
          Length = 949

 Score = 78.2 bits (191), Expect = 9e-13
 Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 9/124 (7%)
 Frame = -1

Query: 427  VWFSAGSVPRFSFCSWLAYKGRLYTKNKLMSFGVLDNATCSLCGTDIETEE*HLFFECFY 248
            +WF  G +PR +F  W+A   RL+T ++L SFG++ ++TC LCG   ET + HLFF+C Y
Sbjct: 786  IWFK-GHIPRQAFILWIASMDRLHTMDRLTSFGIIPSSTCVLCGMHNETHD-HLFFQCTY 843

Query: 247  ST--------QIIKACPYVVPTNFHAIISST-ELSDSFHLQILKLFITTSIYYIWQQRNC 95
            S+        + + A P +          ST   +  F   I +L ++TS+Y+IW +RN 
Sbjct: 844  SSILWGNISAKTLIAWPSLTWNGLLLWAGSTLRNNKEFSHIIARLVLSTSVYFIWFERNN 903

Query: 94   RIWS 83
            RI++
Sbjct: 904  RIFN 907


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 7/137 (5%)
 Frame = -1

Query: 481  SHIYNSSIQHSCVSWSTFVWFSAGSVPRFSFCSWLAYKGRLYTKNKLMSFGVLDNATCSL 302
            +HI  SS Q +   W   VWF A + P+FSFC+WLA + RL T +++M++      TC  
Sbjct: 767  NHIRTSSNQRA---WHKGVWF-AHATPKFSFCAWLAIRNRLSTGDRMMTWNNGTPTTCVF 822

Query: 301  CGTDIETEE*HLFFECFYSTQIIKACPYVV-----PTNFHAIIS--STELSDSFHLQILK 143
            C + +ET + HLFF+C YS++I  +    V      T + A+++  S    D     + +
Sbjct: 823  CSSPMETRD-HLFFQCCYSSEIWTSIAKNVYKDRFSTKWSAVVNYISDSQPDRIQSFLSR 881

Query: 142  LFITTSIYYIWQQRNCR 92
                 SI+ IW++RN R
Sbjct: 882  YTFQVSIHSIWRERNSR 898


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
 Frame = -1

Query: 445  VSWSTFVWFSAGSVPRFSFCSWLAYKGRLYTKNKLMSFGVLDNATCSLCGTDIETEE*HL 266
            V W   VWF   +VPR SF  W+A + +L T++KL  FG+     CSLC  + E    HL
Sbjct: 1213 VEWHDIVWFK-NAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCLRNNEDHN-HL 1270

Query: 265  FFECFYST----QIIKACPYVVPT-NFHAIISSTELS---DSFHLQILKLFITTSIYYIW 110
            FFEC Y+      +   C     T  +   I    +S    SF     KL    ++Y++W
Sbjct: 1271 FFECSYTKAIWWDVCDRCDIPRMTKGWDEWIRWATVSWHGKSFVNFSRKLSFAATVYHVW 1330

Query: 109  QQRNCRIWSPAEALTPVQIIQRVKVLIRQKI 17
            Q+RN RI++   + TP  ++ +++ +IR K+
Sbjct: 1331 QERNARIFA-GMSRTPNLVLNQIECIIRDKL 1360


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
 Frame = -1

Query: 445 VSWSTFVWFSAGSVPRFSFCSWLAYKGRLYTKNKLMSFGVLDNATCSLCGTDIETEE*HL 266
           V W   VWF   +VPR SF  W+A + +L T++KL  FG+     CSLC  + E    HL
Sbjct: 340 VEWHDIVWFK-NAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHN-HL 397

Query: 265 FFECFYST----QIIKACPYVVPT-NFHAIISSTELS---DSFHLQILKLFITTSIYYIW 110
           FFEC Y+      +   C     T  +   I    +S    SF     KL    ++Y++W
Sbjct: 398 FFECSYTKAIWWDVCDRCDIPRMTKGWDEWIRWATVSWHGKSFVNFSCKLSFAATVYHVW 457

Query: 109 QQRNCRIWSPAEALTPVQIIQRVKVLIRQKI 17
           Q+RN RI++   + TP  ++ +++ +IR K+
Sbjct: 458 QERNARIFA-GMSRTPNLVLNQIECIIRDKL 487