BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035717
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat...    89   4e-16
emb|CBI21970.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat...    78   7e-13
ref|XP_002514843.1| pentatricopeptide repeat-containing protein,...    78   7e-13
emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]    78   7e-13

>ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/83 (48%), Positives = 56/83 (67%)
 Frame = +3

Query: 129 NVGNLQDAHHMFDEMISMQPVPSIFYFTKLLTIISNMKHYDSAAVLYNKMCALGLPVNYF 308
           NV  + DA  +F+ M+ M+P PSI  F+KLLT I+ MKHY +   LY +M + G+P N +
Sbjct: 31  NVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY 90

Query: 309 TMTVAVNCYCHLNMPGFAFSVFG 377
           T+ + +N +CHLN  GFAFSV G
Sbjct: 91  TLNILINSFCHLNRLGFAFSVLG 113


>emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 35/69 (50%), Positives = 48/69 (69%)
 Frame = +3

Query: 171 MISMQPVPSIFYFTKLLTIISNMKHYDSAAVLYNKMCALGLPVNYFTMTVAVNCYCHLNM 350
           M+ M+P PSI  F+KLLT I+ MKHY +   LY +M + G+P N +T+ + +N +CHLN 
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60

Query: 351 PGFAFSVFG 377
            GFAFSV G
Sbjct: 61  LGFAFSVLG 69


>ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/81 (45%), Positives = 50/81 (61%)
 Frame = +3

Query: 129 NVGNLQDAHHMFDEMISMQPVPSIFYFTKLLTIISNMKHYDSAAVLYNKMCALGLPVNYF 308
           N   L DA   F+ M+ M P PSI  FTKLL  I+ MKHY +   L ++M + G+P N +
Sbjct: 36  NFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIY 95

Query: 309 TMTVAVNCYCHLNMPGFAFSV 371
           T+ + +N +CHL   GFAFSV
Sbjct: 96  TLNILINSFCHLQRLGFAFSV 116


>ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545894|gb|EEF47397.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 594

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 34/80 (42%), Positives = 48/80 (60%)
 Frame = +3

Query: 138 NLQDAHHMFDEMISMQPVPSIFYFTKLLTIISNMKHYDSAAVLYNKMCALGLPVNYFTMT 317
           N  DA   F++M+ M P P I  F +LL  +  MKHYDS   +Y KM   G+  + +T+T
Sbjct: 84  NFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLT 143

Query: 318 VAVNCYCHLNMPGFAFSVFG 377
           + +NC CHL++ G  FSV G
Sbjct: 144 ILINCLCHLHLVGLGFSVLG 163


>emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/81 (45%), Positives = 50/81 (61%)
 Frame = +3

Query: 129 NVGNLQDAHHMFDEMISMQPVPSIFYFTKLLTIISNMKHYDSAAVLYNKMCALGLPVNYF 308
           N   L DA   F+ M+ M P PSI  FTKLL  I+ MKHY +   L ++M + G+P N +
Sbjct: 45  NFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIY 104

Query: 309 TMTVAVNCYCHLNMPGFAFSV 371
           T+ + +N +CHL   GFAFSV
Sbjct: 105 TLNILINSFCHLQRLGFAFSV 125