BLASTX nr result

ID: Bupleurum21_contig00035709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035709
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271878.2| PREDICTED: uracil-DNA glycosylase [Vitis vin...   176   4e-42
emb|CBI27448.3| unnamed protein product [Vitis vinifera]              172   3e-41
emb|CAN75314.1| hypothetical protein VITISV_028740 [Vitis vinifera]   171   1e-40
ref|XP_004140430.1| PREDICTED: uracil-DNA glycosylase-like [Cucu...   170   2e-40
ref|XP_003540731.1| PREDICTED: uracil-DNA glycosylase-like [Glyc...   166   3e-39

>ref|XP_002271878.2| PREDICTED: uracil-DNA glycosylase [Vitis vinifera]
          Length = 328

 Score =  176 bits (445), Expect = 4e-42
 Identities = 98/187 (52%), Positives = 115/187 (61%), Gaps = 29/187 (15%)
 Frame = +1

Query: 142 MASSKTLVDYFQPHKRRKTXXXXXXXXXXXXXXXXXX----------------------- 252
           MA+SKTL+DY QP KR K                                          
Sbjct: 1   MAASKTLMDYLQPSKRLKVSTPTSSSSSSSSSPKSLLLPVSSLSHSQSQDPHQSPPSSPS 60

Query: 253 -----DQKSRIEFNQLIAKSKRNLKLCSDRISKS-ATGGGVLDMNLKLGELLVEETWLEA 414
                 QKSRIEFN+ +AKSKRNL +CS ++SKS A G G +++     +LL+EETWL+A
Sbjct: 61  SALTAHQKSRIEFNKFLAKSKRNLTICSQKVSKSKAEGVGFVELE----DLLLEETWLDA 116

Query: 415 LADEFEKPYAKKLCDFVETEIRSSGVPIYPPPHLIFNAFNTTPFDRVKAVIIGQDPYHGP 594
           L  EF+KPYAK LC F+E E+  SGVPIYPP HLIFNA N+TPFDRVKAVIIGQDPYHGP
Sbjct: 117 LPGEFQKPYAKTLCRFLEREVCGSGVPIYPPQHLIFNALNSTPFDRVKAVIIGQDPYHGP 176

Query: 595 GQAMGLS 615
           GQAMGLS
Sbjct: 177 GQAMGLS 183


>emb|CBI27448.3| unnamed protein product [Vitis vinifera]
          Length = 321

 Score =  172 bits (437), Expect = 3e-41
 Identities = 85/121 (70%), Positives = 100/121 (82%), Gaps = 1/121 (0%)
 Frame = +1

Query: 256 QKSRIEFNQLIAKSKRNLKLCSDRISKS-ATGGGVLDMNLKLGELLVEETWLEALADEFE 432
           QKSRIEFN+ +AKSKRNL +CS ++SKS A G G +++     +LL+EETWL+AL  EF+
Sbjct: 60  QKSRIEFNKFLAKSKRNLTICSQKVSKSKAEGVGFVELE----DLLLEETWLDALPGEFQ 115

Query: 433 KPYAKKLCDFVETEIRSSGVPIYPPPHLIFNAFNTTPFDRVKAVIIGQDPYHGPGQAMGL 612
           KPYAK LC F+E E+  SGVPIYPP HLIFNA N+TPFDRVKAVIIGQDPYHGPGQAMGL
Sbjct: 116 KPYAKTLCRFLEREVCGSGVPIYPPQHLIFNALNSTPFDRVKAVIIGQDPYHGPGQAMGL 175

Query: 613 S 615
           S
Sbjct: 176 S 176


>emb|CAN75314.1| hypothetical protein VITISV_028740 [Vitis vinifera]
          Length = 281

 Score =  171 bits (432), Expect = 1e-40
 Identities = 85/121 (70%), Positives = 99/121 (81%), Gaps = 1/121 (0%)
 Frame = +1

Query: 256 QKSRIEFNQLIAKSKRNLKLCSDRISKS-ATGGGVLDMNLKLGELLVEETWLEALADEFE 432
           QKSRIEFN+ +A SKRNL +CS ++SKS A G G +++     +LLVEETWL+AL  EF+
Sbjct: 58  QKSRIEFNKFLAISKRNLTICSQKVSKSKAEGVGFVELE----DLLVEETWLDALPGEFQ 113

Query: 433 KPYAKKLCDFVETEIRSSGVPIYPPPHLIFNAFNTTPFDRVKAVIIGQDPYHGPGQAMGL 612
           KPYAK LC F+E E+  SGVPIYPP HLIFNA N+TPFDRVKAVIIGQDPYHGPGQAMGL
Sbjct: 114 KPYAKTLCRFLEREVCGSGVPIYPPQHLIFNALNSTPFDRVKAVIIGQDPYHGPGQAMGL 173

Query: 613 S 615
           S
Sbjct: 174 S 174


>ref|XP_004140430.1| PREDICTED: uracil-DNA glycosylase-like [Cucumis sativus]
           gi|449518103|ref|XP_004166083.1| PREDICTED: uracil-DNA
           glycosylase-like [Cucumis sativus]
          Length = 318

 Score =  170 bits (431), Expect = 2e-40
 Identities = 96/170 (56%), Positives = 109/170 (64%), Gaps = 13/170 (7%)
 Frame = +1

Query: 145 ASSKTLVDYFQP--HKRRKTXXXXXXXXXXXXXXXXXX-----------DQKSRIEFNQL 285
           + ++TL+D FQP   KR KT                              Q SR+E N+ 
Sbjct: 10  SKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQISRMETNKW 69

Query: 286 IAKSKRNLKLCSDRISKSATGGGVLDMNLKLGELLVEETWLEALADEFEKPYAKKLCDFV 465
           IA+SKRNLK CSDR+SK   G       +KL ELLVEETW EAL  EF+KPYA  LC FV
Sbjct: 70  IARSKRNLKTCSDRVSKWENGC------VKLEELLVEETWFEALPGEFQKPYALNLCKFV 123

Query: 466 ETEIRSSGVPIYPPPHLIFNAFNTTPFDRVKAVIIGQDPYHGPGQAMGLS 615
           +TEI SSGVPIYPPP LIFNA N+TPFDRVK VI+GQDPYHGPGQAMGLS
Sbjct: 124 QTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLS 173


>ref|XP_003540731.1| PREDICTED: uracil-DNA glycosylase-like [Glycine max]
          Length = 303

 Score =  166 bits (420), Expect = 3e-39
 Identities = 93/160 (58%), Positives = 106/160 (66%), Gaps = 3/160 (1%)
 Frame = +1

Query: 145 ASSKTLVDYFQP-HKRRKTXXXXXXXXXXXXXXXXXXDQKSRIEFNQLIAKSKRNLKLCS 321
           A S+TL D+FQP  KR K                   DQK R+E+N+L+AKSKRNLKLC 
Sbjct: 4   APSRTLTDFFQPASKRLKPTLPASCKSDDANASTLSVDQKLRMEYNKLLAKSKRNLKLCV 63

Query: 322 DRISKSATGG--GVLDMNLKLGELLVEETWLEALADEFEKPYAKKLCDFVETEIRSSGVP 495
           +R+SKS   G  GV     KL ELLVEETWLEAL  E +KPYA  L  FVE+EI      
Sbjct: 64  ERVSKSKESGLGGV-----KLEELLVEETWLEALPGELQKPYALTLSKFVESEISGGDGV 118

Query: 496 IYPPPHLIFNAFNTTPFDRVKAVIIGQDPYHGPGQAMGLS 615
           I+PP HLIFNA N+TPF  VKAVI+GQDPYHGPGQAMGLS
Sbjct: 119 IFPPTHLIFNALNSTPFHTVKAVILGQDPYHGPGQAMGLS 158


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