BLASTX nr result

ID: Bupleurum21_contig00035695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035695
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange f...    84   4e-35
ref|XP_004166838.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine ...    84   4e-35
ref|XP_002303291.1| predicted protein [Populus trichocarpa] gi|2...    82   1e-34
emb|CBI28054.3| unnamed protein product [Vitis vinifera]               80   5e-34
ref|XP_002280831.1| PREDICTED: rho guanine nucleotide exchange f...    80   5e-34

>ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis
           sativus]
          Length = 676

 Score = 84.0 bits (206), Expect(3) = 4e-35
 Identities = 38/55 (69%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
 Frame = +2

Query: 92  DCLDNFKGPNEFWYVSKDADESEKGVT-RDDKWWLPTIKVPSEGLSEASRKFLKF 253
           DCLDNFK  NEF+YVS+DA++SEKG   R+DKWWLPT KVP  GLS+ SRKFL++
Sbjct: 346 DCLDNFKDQNEFYYVSRDANDSEKGNNKRNDKWWLPTAKVPPNGLSDMSRKFLQY 400



 Score = 68.6 bits (166), Expect(3) = 4e-35
 Identities = 31/37 (83%), Positives = 36/37 (97%)
 Frame = +2

Query: 323 SWGSAVSLEKRELFEERAETILLLLKQRFPGLPQSSM 433
           +WGSAVS+EKRELFEERAETILL+LK RFPG+PQSS+
Sbjct: 497 TWGSAVSMEKRELFEERAETILLILKHRFPGIPQSSL 533



 Score = 41.2 bits (95), Expect(3) = 4e-35
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +3

Query: 267 GRASLGDQMYKSITVEFFDP 326
           GRASLGD +YKSITVEFFDP
Sbjct: 437 GRASLGDSIYKSITVEFFDP 456


>ref|XP_004166838.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine nucleotide exchange
           factor 8-like [Cucumis sativus]
          Length = 553

 Score = 84.0 bits (206), Expect(3) = 4e-35
 Identities = 38/55 (69%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
 Frame = +2

Query: 92  DCLDNFKGPNEFWYVSKDADESEKGVT-RDDKWWLPTIKVPSEGLSEASRKFLKF 253
           DCLDNFK  NEF+YVS+DA++SEKG   R+DKWWLPT KVP  GLS+ SRKFL++
Sbjct: 223 DCLDNFKDQNEFYYVSRDANDSEKGNNKRNDKWWLPTAKVPPNGLSDMSRKFLQY 277



 Score = 68.6 bits (166), Expect(3) = 4e-35
 Identities = 31/37 (83%), Positives = 36/37 (97%)
 Frame = +2

Query: 323 SWGSAVSLEKRELFEERAETILLLLKQRFPGLPQSSM 433
           +WGSAVS+EKRELFEERAETILL+LK RFPG+PQSS+
Sbjct: 374 TWGSAVSMEKRELFEERAETILLILKHRFPGIPQSSL 410



 Score = 41.2 bits (95), Expect(3) = 4e-35
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +3

Query: 267 GRASLGDQMYKSITVEFFDP 326
           GRASLGD +YKSITVEFFDP
Sbjct: 314 GRASLGDSIYKSITVEFFDP 333


>ref|XP_002303291.1| predicted protein [Populus trichocarpa] gi|222840723|gb|EEE78270.1|
           predicted protein [Populus trichocarpa]
          Length = 454

 Score = 82.0 bits (201), Expect(3) = 1e-34
 Identities = 37/56 (66%), Positives = 46/56 (82%), Gaps = 2/56 (3%)
 Frame = +2

Query: 92  DCLDNFKGPNEFWYVSKDADESEKGVTR--DDKWWLPTIKVPSEGLSEASRKFLKF 253
           D LDNFK  NEF+YVS+D+ ESEKG T+  DDKWWLPT+KVP +GLSE ++KFL +
Sbjct: 121 DSLDNFKDQNEFYYVSRDSPESEKGGTKRKDDKWWLPTVKVPPDGLSERAKKFLHY 176



 Score = 72.8 bits (177), Expect(3) = 1e-34
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +2

Query: 323 SWGSAVSLEKRELFEERAETILLLLKQRFPGLPQSSM 433
           +WGSAVSLEKRELFEERAETILLLLKQRFPGLPQSS+
Sbjct: 273 AWGSAVSLEKRELFEERAETILLLLKQRFPGLPQSSL 309



 Score = 37.0 bits (84), Expect(3) = 1e-34
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +3

Query: 267 GRASLGDQMYKSITVEFFDP 326
           GRASLGD  Y+SIT+E+FDP
Sbjct: 213 GRASLGDSAYRSITLEYFDP 232


>emb|CBI28054.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score = 80.5 bits (197), Expect(3) = 5e-34
 Identities = 36/52 (69%), Positives = 43/52 (82%)
 Frame = +2

Query: 98  LDNFKGPNEFWYVSKDADESEKGVTRDDKWWLPTIKVPSEGLSEASRKFLKF 253
           LDNFKGPNEFWYVS+DA+++  G   DDKWWLP  KVP  GLS+ASRK+L+F
Sbjct: 222 LDNFKGPNEFWYVSRDAEDA--GSREDDKWWLPRPKVPPNGLSDASRKWLQF 271



 Score = 68.2 bits (165), Expect(3) = 5e-34
 Identities = 33/37 (89%), Positives = 35/37 (94%)
 Frame = +2

Query: 323 SWGSAVSLEKRELFEERAETILLLLKQRFPGLPQSSM 433
           +WGSAVSLEKRELFEERAETILLLLKQRFPGL QS +
Sbjct: 368 TWGSAVSLEKRELFEERAETILLLLKQRFPGLAQSQL 404



 Score = 41.2 bits (95), Expect(3) = 5e-34
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +3

Query: 267 GRASLGDQMYKSITVEFFDP 326
           GRASLGD +YKSITVEFFDP
Sbjct: 308 GRASLGDSIYKSITVEFFDP 327


>ref|XP_002280831.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Vitis
           vinifera]
          Length = 506

 Score = 80.5 bits (197), Expect(3) = 5e-34
 Identities = 36/52 (69%), Positives = 43/52 (82%)
 Frame = +2

Query: 98  LDNFKGPNEFWYVSKDADESEKGVTRDDKWWLPTIKVPSEGLSEASRKFLKF 253
           LDNFKGPNEFWYVS+DA+++  G   DDKWWLP  KVP  GLS+ASRK+L+F
Sbjct: 173 LDNFKGPNEFWYVSRDAEDA--GSREDDKWWLPRPKVPPNGLSDASRKWLQF 222



 Score = 68.2 bits (165), Expect(3) = 5e-34
 Identities = 33/37 (89%), Positives = 35/37 (94%)
 Frame = +2

Query: 323 SWGSAVSLEKRELFEERAETILLLLKQRFPGLPQSSM 433
           +WGSAVSLEKRELFEERAETILLLLKQRFPGL QS +
Sbjct: 319 TWGSAVSLEKRELFEERAETILLLLKQRFPGLAQSQL 355



 Score = 41.2 bits (95), Expect(3) = 5e-34
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +3

Query: 267 GRASLGDQMYKSITVEFFDP 326
           GRASLGD +YKSITVEFFDP
Sbjct: 259 GRASLGDSIYKSITVEFFDP 278


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